Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01066 ATGAGGTACTTAAAATATTTTATATCTTTTATTGTTTTAAAAGAAAATATCCACTTAAGTATCGTGCAATTGGTGACATATAGAACTACTCTTTTTTTTATATATATATTGTCAAAATTTGTTTGTTATATTTTTACAGGGTTGAATAGATGCCGAAAAAGTTGTAGATTGAGGTGGTTGAATTATTTAAATCCCAACATCAACAGAGGAAGCTTTACTGAGGATGAAGTTGATATGATTCTAAGGTTACATAAACTTCTAGGAAACAGATGGTCCTTGATAGCTGCAAGGCTTCCGGGTAGAACAGCTAATGATGTGAAGAACTACTGGCACACACACTTGAGCAAGAAGAAGGTGACCTATAATTATATCAAGGAAGACAACAAAGAAAAGGAGAAACCAGTAAAGGAAACCGTGAAACCTCATGAAGTTATAAAACCTCGACCTCGATTTTTTTCAAATAATTCACCATGGTTGAAGGGGAAACACGTTCTTGAAAATTATGGTGATGTAATTAGAGAGTGTGCTATACCTCTAGTGGCTTCAAATGATGATAATGTTCCGATTGCAAAGTGTGACACACAAACAACTGTGCTCCCACTTGGGGGTTATGGAGATTGTGATGCACAACCATATTTTGCTAATGCCCCACATTCTGCAATGTGGTGGGAGAGCTTGTTGAACTTGGATGACAATGTAGGCGATGGTGAGAAAGTTGGCACATATTCTTTGTCAAATGAGAATTCCATCTTGGAGCTTCCAAATGTGGAGAACTTCACCCAAGGCTCCACTGGTAGTGATTGTTATTGGGATTCCAGCCTCTGTGATTTTTATTCTCTTTGGGATCTATAA 852 0.3697 MRYLKYFISFIVLKENIHLSIVQLVTYRTTLFFIYILSKFVCYIFTGLNRCRKSCRLRWLNYLNPNINRGSFTEDEVDMILRLHKLLGNRWSLIAARLPGRTANDVKNYWHTHLSKKKVTYNYIKEDNKEKEKPVKETVKPHEVIKPRPRFFSNNSPWLKGKHVLENYGDVIRECAIPLVASNDDNVPIAKCDTQTTVLPLGGYGDCDAQPYFANAPHSAMWWESLLNLDDNVGDGEKVGTYSLSNENSILELPNVENFTQGSTGSDCYWDSSLCDFYSLWDL. 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01066 283 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Seca7g01066 283 SUPERFAMILY Homeodomain-like 49 121 IPR009057 -
Seca7g01066 283 CDD SANT 71 114 IPR001005 -
Seca7g01066 283 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 46 137 - -
Seca7g01066 283 Pfam Myb-like DNA-binding domain 69 114 IPR001005 -
Seca7g01066 283 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Seca7g01066 283 Gene3D - 70 143 - -
Seca7g01066 283 SMART sant 68 116 IPR001005 -
Seca7g01066 283 Gene3D - 23 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01066 Seca-Chr7 14478335 14480783 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01066 44 154 MYB Transcription Factor Family AT1G66370 64.286 1.53e-41 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Seca7g01066 Myb_DNA-binding 1.9e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01066 - K09422 tpra:123921946 228.024