Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01064 ATGGAGAAGGCGAGAGGCATGAGAAAAGGCGCATGGACATATGAGGAAGACAACCTACTAAAGGCTTGCATTAACAAGTATGGGGTAGGAAAATGGCATTTGGTTCCTCAAAAAGCAGGATTGAATAGGTGTCGAAAAAGTTGTAGATTGAGGTGGTTGAATTATTTAAGTCCCAACATCAACAGAGGAAGCTTTGCTGAGGATGAAGTTGATATGATTCTAAGGTTACATAAACTCCTAGGGAACAGGTGGTCATTGATTGCCGCAAGGCTTCCAGGTAGGACAGCTAACGATGTGAAGAACTACTGGCACTCACACTTAAGCAAGAAGAAGGTGACCTCTAATTATAACATGGATAACAAGAAAGAAAAAGAGAAACCCATAATGGAAACCATGAAACCTCATGAAGTTATAAAACCTCGACCTCGAACTTTTTCAAATAATTCACCATGGTTGAAGGGGAAACACATTCTTGCAAATGATGGTATTGGTGTAATTAGAGAGTGTGCTATGCCTCTAGTGGCTTCAAATGATGATAATGTTCCAACAGAGACAACTATGCTCCCACTTGGGGGTGATAGAGATTGTGATGCCCCACAGTCGTCTGCAATGTGGTGGGAGAGTTTGTTGAACTTGGATGACAATGTAGGCGATGATGAGAAAGTTGGCACATGTTCTTTGTCAAATGAGAATTCCATCTTGGAGCTTCCAAATGTGGAGAACTTCTTCACCCAAGGCCCCACTGGTGGTACTGACTGTTGCTGGGATTCCAACCTTTGTGATTTTGATTCTCTTTGGGATCTTTAA 807 0.4201 MEKARGMRKGAWTYEEDNLLKACINKYGVGKWHLVPQKAGLNRCRKSCRLRWLNYLSPNINRGSFAEDEVDMILRLHKLLGNRWSLIAARLPGRTANDVKNYWHSHLSKKKVTSNYNMDNKKEKEKPIMETMKPHEVIKPRPRTFSNNSPWLKGKHILANDGIGVIRECAMPLVASNDDNVPTETTMLPLGGDRDCDAPQSSAMWWESLLNLDDNVGDDEKVGTCSLSNENSILELPNVENFFTQGPTGGTDCCWDSNLCDFDSLWDL. 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01064 268 Gene3D - 9 61 - -
Seca7g01064 268 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 5 129 - -
Seca7g01064 268 ProSiteProfiles Myb-like domain profile. 57 107 IPR001005 -
Seca7g01064 268 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 4 56 IPR017930 -
Seca7g01064 268 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 57 111 IPR017930 -
Seca7g01064 268 SMART sant 61 109 IPR001005 -
Seca7g01064 268 SMART sant 8 58 IPR001005 -
Seca7g01064 268 CDD SANT 67 107 IPR001005 -
Seca7g01064 268 Pfam Myb-like DNA-binding domain 9 56 IPR001005 -
Seca7g01064 268 Pfam Myb-like DNA-binding domain 62 107 IPR001005 -
Seca7g01064 268 CDD SANT 11 56 IPR001005 -
Seca7g01064 268 Gene3D - 64 134 - -
Seca7g01064 268 FunFam Myb transcription factor 9 61 - -
Seca7g01064 268 SUPERFAMILY Homeodomain-like 6 103 IPR009057 -
Seca7g01064 268 ProSiteProfiles Myb-like domain profile. 4 56 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01064 Seca-Chr7 14429769 14432032 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01064 2 213 MYB Transcription Factor Family AT1G66370 49.772 1.06e-62 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Seca7g01064 Myb_DNA-binding 1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01064 - K09422 tpra:123921946 291.197