Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01048 ATGGCTCTGGCCAATGACAAAATTCCTTGTGGTTCAAGCATGAGCAGTAGAAAGTTTCAAACTTGTGCTCTTGATGAGACTTCTATGGAGATTTCTCCTCATGGGGTCAAGGATTATCAAAAATCTGTTGTTGAAGAGGAAGATGGATCACAGAGTACTAATGGCCTCAGCAATGATTCAGCTTCAGCTTCAGCTATAACCCATTCTTCTCCTTTATGTGGCAGTGCAAATGGGTATGTTTACAAGAGTTCAAATTATCAACTTGAAGAAGCAGAGTCTCTGATTAATTTCAAAGCCAATGAGTATAGCAACCTCATGCAAGGTAGTGAATCTGTTCTTAGCTTTCAGCAGAGCTGGTTGGTCTCCAATGAGGACAATTTGAACCAATGGAATCATATTAGTCCTAAAGGCACCACAAACTTGAGCATGGTTCAGGATTTCACTTGCTTTGAAACTTCCAGTGGCTATAGCTCCATGTTTAACAGTGCAAAAGAGAAACAACATGGTGAAAGTTCATATGAGTGGCTATACTCTGAACCAAATGTCCCTGGTGAAAGTCTCAAGGAGTCATCAACACAAGAATCAATCTTGAAGAAGCGTTCTTCAATGGGAGAGAATATGCAAAATTCCAATGCCAAGAAGCCATGCACAACTGCAAGCAAAATAGCAAAACCCAAGTCAAACCCATCTAAAGATCCTCAAAGTGTTGCTGCTAAGAATAGAAGAGAGAGAATAAGTGAGAGGCTTAAGATCCTACAAGAACTTGTACCCAACGGCTCCAAAGTGGGTTTCTTAAACTAG 801 0.4057 MALANDKIPCGSSMSSRKFQTCALDETSMEISPHGVKDYQKSVVEEEDGSQSTNGLSNDSASASAITHSSPLCGSANGYVYKSSNYQLEEAESLINFKANEYSNLMQGSESVLSFQQSWLVSNEDNLNQWNHISPKGTTNLSMVQDFTCFETSSGYSSMFNSAKEKQHGESSYEWLYSEPNVPGESLKESSTQESILKKRSSMGENMQNSNAKKPCTTASKIAKPKSNPSKDPQSVAAKNRRERISERLKILQELVPNGSKVGFLN. 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01048 266 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 78 262 IPR045843 GO:0003700|GO:0006355
Seca7g01048 266 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 227 260 IPR036638 GO:0046983
Seca7g01048 266 MobiDBLite consensus disorder prediction 184 235 - -
Seca7g01048 266 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 229 266 IPR011598 GO:0046983
Seca7g01048 266 MobiDBLite consensus disorder prediction 182 242 - -
Seca7g01048 266 MobiDBLite consensus disorder prediction 33 62 - -
Seca7g01048 266 MobiDBLite consensus disorder prediction 46 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01048 Seca-Chr7 14126439 14128817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01048 78 265 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G37800 34.466 2.47e-23 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01048 - - gmx:106795957 342.428