Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g01003 ATGGCAATTGGGATCATGGAGGTGCATCTTGTGAAAGCAAAAGGCCTGCAGAACAATGATATCTTTGGTAAAATGGACCCATATGTTCTGATACAATACAAAGGGCAAGAGCAGAGGAGCAGTGTTGCCATTGACCAGGGAAGAAATCCTGAGTGGAATGAGAAATTTACCTTCAGAGTAGAATACCCTGAAGCAGGATCAGGCAAAACCAAGCTCATCCTCAAAATCATGGACGAGGACACATTATCTGCTGATGACTTTATTGGACAAGCCACAATCTATGTAGGGGATTTATTGGCCCAAGGAGTAGAGAATGGAGGAGCTAAGCTACAGCCTCAAAAGCATAGAGTGGTTTGTGAAAACCAGTCTTATTGTGGTGAAATTACTGTTGGTATCACTTTCACCCCAAAGGTGGAAGACAAATTTATTGAAAAAGCCATGGGAGGATGGAAAGGAAGTGACTAG 465 0.428 MAIGIMEVHLVKAKGLQNNDIFGKMDPYVLIQYKGQEQRSSVAIDQGRNPEWNEKFTFRVEYPEAGSGKTKLILKIMDEDTLSADDFIGQATIYVGDLLAQGVENGGAKLQPQKHRVVCENQSYCGEITVGITFTPKVEDKFIEKAMGGWKGSD. 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g01003 154 Gene3D C2 domain 2 137 IPR035892 -
Seca7g01003 154 ProSiteProfiles C2 domain profile. 1 108 IPR000008 -
Seca7g01003 154 PANTHER C2 DOMAIN-CONTAINING 3 138 - -
Seca7g01003 154 SMART C2_3c 5 107 IPR000008 -
Seca7g01003 154 CDD C2_putative_Elicitor-responsive_gene 4 128 - -
Seca7g01003 154 Pfam C2 domain 4 105 IPR000008 -
Seca7g01003 154 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 138 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g01003 Seca-Chr7 13067763 13069517 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g01003 3 110 C2H2 Transcription Factor Family AT4G21160 31.481 3.84e-10 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g01003 - - gmx:100791344 221.861