Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca7g00986 | ATGCTGAATAATATTTCACGCTTCGAAGTGGAGCGTACTAAACACGCGCATGGTCCACTGAATTCACGCGCTGAGATGCGCGTGTGTGTTCAAACCATGGGTGATGCAATTGATTTGACTGGGGATGGAGGAGTCATCAAGACCATTGTGAAGAAAAGCAAATCAGATGCTGTGGGTCCTACAGAAGATTTTCCTCTTGTTGATGGTGCTACAGAAGTCATTTCAATTATAGATTGTCTTATCTTCTTATGTGGAAGAAAAAGTAGGATATCTCTGATACTTTTCCTGTTGGCCATTGGTATGCTCTTATCTTCAACTTTACATTACGAAGGCACGCTTGCTGATACTGGTGAAGTATTTGACACTACACATGAAGATAACACAATCTTCTCTTTCGAGGTCGGAAAGGGTAGTGTCATCAAGGCTTGGGATATTGCAGTGAAAACCATGAAGGTTGGAGAAATTGCGAAAATAACATGCAAACCAGAATATGCATATGGTAGTGCAGGATCTCCGCCAGATATTCCCCCAGATGCAACACTTGTTTTCGAAGTTGAACTAGTTGCCTGTAGGCCACGAAAGGGCTCCAGTCTGGGAAGTGTTTCAGAGGAGAGGGCTAGGCTAGAAGAGCTGAAGAAGCAGAGAGAGATGGCTGCTGCTGCCAAAGAGGAGGAGAAGAAGAAGAGGGAAGAAGCAAAAGCAGCAGCTGCAGCTCGTGTGCAAGCCAAGTTAGAAGCCAAGAAAGGTCAAGGAAAGGGTAAAGGGAAAGCAAAGTAG | 777 | 0.4466 | MLNNISRFEVERTKHAHGPLNSRAEMRVCVQTMGDAIDLTGDGGVIKTIVKKSKSDAVGPTEDFPLVDGATEVISIIDCLIFLCGRKSRISLILFLLAIGMLLSSTLHYEGTLADTGEVFDTTHEDNTIFSFEVGKGSVIKAWDIAVKTMKVGEIAKITCKPEYAYGSAGSPPDIPPDATLVFEVELVACRPRKGSSLGSVSEERARLEELKKQREMAAAAKEEEKKKREEAKAAAAARVQAKLEAKKGQGKGKGKAK. | 259 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca7g00986 | 258 | MobiDBLite | consensus disorder prediction | 219 | 258 | - | - | |
Seca7g00986 | 258 | SUPERFAMILY | FKBP-like | 106 | 194 | - | - | |
Seca7g00986 | 258 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 106 | 188 | IPR001179 | GO:0003755 | |
Seca7g00986 | 258 | Coils | Coil | 201 | 240 | - | - | |
Seca7g00986 | 258 | MobiDBLite | consensus disorder prediction | 219 | 236 | - | - | |
Seca7g00986 | 258 | Gene3D | - | 104 | 190 | IPR046357 | GO:0003755 | |
Seca7g00986 | 258 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 102 | 191 | IPR001179 | GO:0003755 | |
Seca7g00986 | 258 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 106 | 251 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca7g00986 | Seca-Chr7 | 12645121 | 12649067 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca7g00986 | 111 | 216 | Calmodulin-binding Proteins | AT5G48570 | 38.739 | 5.88e-11 | 60.5 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca7g00986 | K01802 | - | gmx:100500018 | 258.84 |