Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00968 ATGGCGAAGGCACTCACACTTCTCCATGTTCTCCTTCTTGCCTCAATCCCTGTAAACTCTACTCACGAAGAGTGGTTTTTTGTTGGGTTCCATGGAGCCAGCAACATAAGCATAAACGGCGATGCAGTGATTGAGGACAATGGCATACTTACCCTTACAAACGACACTGAAAAAGTTCTTGGGCACGCGTTTTATTCAAACCCAATCCACTTCAAGAACAACTCCACTGATGGCAAAGTTTTCTCCTTTTCCACAGCTTTTGCTTTTGCAATAACCACCAAGCTTCCCAAACAAGGTGGTCATGGTTTAGCCTTCACCATTTCTCCCTCTAAAGAGCTTAAAGGTGCTTATCCTGGGCAGTACTTGGGGCTTCTCAACCCACACGATGTGGGGAAATTCTCTACCCACTTGTTTGCAGTGGAGTTTGACACTGTTGAAGACTATGCATTTGGTGAGATCAATGGCAACCACGTTGGTATCAACTTGAACAACATGAAATCTAACAGATCTGTTACTGTTGTTGATGGGTCAACAAAGCAAAACCTCAATTTGCAGAGTGGCAAGGTGATTCAAGCATGGGTAGATTACAATTCCTCTAGCAACCAATTGGATGTTAGGCTTTCCACAACCTCTTCAAAACCCAGTTCCCCAATCTTGTCCTACCAAGTTGATCTCTCACCAATTCTTAAAGACGTTATGTATGTGGGGTTTTCTGCTTCAACAGGGTTGCTAGCGAGCTTGCACTATATCCTTGGTTGGAGCTTCAAAATGAATGGAGAAGCCAAATCTCTGAACTTGGAAACATTACCATCACTCCCTGGGTCTAAGAACATAAAAAAGGCCTTAATACTTGGAATCACTGTTTCTGCTTCTATTCTAACAATAATCTTGGCAATTGGGTTAGCAACTTACCTAATAAGAAAGATGAAGAAAGGTGATGATATTGAAGCTTGGGAGCATAATATTGGCCCCCACAGGTTCCCATATGAGGAGCTGAAACAAGCAACAAAAGGGTTCAAGGAGAAAGAACTAATTGGGTTTGGTGGGTTTGGTCGAGTTTACAAAGGGATTCTACCAAACACCAACACCCAAGTCGCAGTGAAGCGAATCTCCCAGGACTCAAAACAGGGGATGCAACAATTCATGTCAGAGATTGCAACCATTGGTAGGCTCCGTCACAGGAACCTAGTTCAATTACTAGGTTGGTGTCGGAAACGCTATGATCTACTACTTGTGTACGATTTCATGCCCAATGGAAGCTTGGACAAGTACCTATTCGACCAACCCAGAGCAATTTTAAGCTGGGAACAGAGGTTCAAGATCATAAAGGGCGTAGCTTTGGGTCTGGTTTACTTGCATGAGGAATGGGAACAAACGGTGATTCACAGGGACATAAAAGCAGGAAACGTTTTGTTGGATTCACATGGGGCGAATCCAAACACCACGTGTGTTGTGGGAACATTGGGGTACTTAGCACCAGAGTTAACTCGAACGGGGAAACCAACTACTAGTTCTGATGTGTTTGCATTTGGTGCTCTGTTGCTTGAAGTGGCGTGTGGGAGAAGACCCGTTGAGCCTAAAGCGTTGCCGGAGGAACTCATATTGGTGGATTGGGTTCGGGATATGTGGCGGGTCGGTGCTGTTTTGGAGGTTATGGACCCCAAATTGGGTGGGGTGTTTGATAAGGAACAGGCTTTGCTTGTTCTGAAATTGGGGTTGTTGTGTTCAAGTGACAACCCTACTGAACGTCCTAGTATGAGGCAGGTGGTGATGTACTTGGAAGGGGAGGCGGCAGCGCCCCCGGTGGGTGATGGTGGTGAAGTTGGGGACTTTGGCCGGTCAACGTCGTCGTATTTTGATGCATGCGGATCCTTTCCACTTGGTTTTTCAATGGGAGGTCATGCAACAATTTTTTTACGCCTTGAACCCTAA 1932 0.4539 MAKALTLLHVLLLASIPVNSTHEEWFFVGFHGASNISINGDAVIEDNGILTLTNDTEKVLGHAFYSNPIHFKNNSTDGKVFSFSTAFAFAITTKLPKQGGHGLAFTISPSKELKGAYPGQYLGLLNPHDVGKFSTHLFAVEFDTVEDYAFGEINGNHVGINLNNMKSNRSVTVVDGSTKQNLNLQSGKVIQAWVDYNSSSNQLDVRLSTTSSKPSSPILSYQVDLSPILKDVMYVGFSASTGLLASLHYILGWSFKMNGEAKSLNLETLPSLPGSKNIKKALILGITVSASILTIILAIGLATYLIRKMKKGDDIEAWEHNIGPHRFPYEELKQATKGFKEKELIGFGGFGRVYKGILPNTNTQVAVKRISQDSKQGMQQFMSEIATIGRLRHRNLVQLLGWCRKRYDLLLVYDFMPNGSLDKYLFDQPRAILSWEQRFKIIKGVALGLVYLHEEWEQTVIHRDIKAGNVLLDSHGANPNTTCVVGTLGYLAPELTRTGKPTTSSDVFAFGALLLEVACGRRPVEPKALPEELILVDWVRDMWRVGAVLEVMDPKLGGVFDKEQALLVLKLGLLCSSDNPTERPSMRQVVMYLEGEAAAPPVGDGGEVGDFGRSTSSYFDACGSFPLGFSMGGHATIFLRLEP. 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00968 643 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 273 IPR013320 -
Seca7g00968 643 CDD lectin_legume_LecRK_Arcelin_ConA 27 259 IPR001220 GO:0030246
Seca7g00968 643 ProSitePatterns Protein kinases ATP-binding region signature. 345 368 IPR017441 GO:0005524
Seca7g00968 643 FunFam L-type lectin-domain containing receptor kinase S.4 416 604 - -
Seca7g00968 643 FunFam L-type lectin-domain containing receptor kinase S.1 324 415 - -
Seca7g00968 643 PANTHER - 18 600 - -
Seca7g00968 643 SMART serkin_6 339 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g00968 643 ProSiteProfiles Protein kinase domain profile. 339 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g00968 643 Gene3D Phosphorylase Kinase; domain 1 324 415 - -
Seca7g00968 643 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Seca7g00968 643 Pfam Legume lectin domain 25 269 IPR001220 GO:0030246
Seca7g00968 643 Pfam Protein kinase domain 339 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g00968 643 FunFam L-type lectin-domain containing receptor kinase S.4 21 263 - -
Seca7g00968 643 Gene3D - 16 270 - -
Seca7g00968 643 Gene3D Transferase(Phosphotransferase) domain 1 416 599 - -
Seca7g00968 643 SUPERFAMILY Protein kinase-like (PK-like) 321 595 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00968 Seca-Chr7 12336652 12338631 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00968 18 602 Receptor kinase-like Gene Family AT3G55550 57.213 0.0 697
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Seca7g00968 Pkinase 4.8e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00968 - - gmx:100787552 822.772