Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00939 ATGAAGGCATTGATTCTGGTTGGGGGGTTTGGGACAAGGTTGAGGCCATTGACACTCAGTGTCCCTAAACCTCTTGTTGATTTTGCTAACAAGCCCATGATTCTGCATCAGATAGAGGCTCTTAAGGCTGCTGGAGTTACTGAAGTGGTACTAGCCATCAATTACCAACCAGAGCTACTGCAGGTTATGTTGAATTTCTTGAAGGATTTTGAAGCAAAGCTTGGCATCAAGATCACATGTTCTCAAGAAACTGAACCACTGGGAACTGCAGGCCCCCTGGCTCTTGCTAGGGATAAGCTGATAGATGACTCTGGAGAGCCATTTTTTGTTCTCAATAGTGATGTTATCAGTGAGTACCCACTTAAAGAAATGATTGAATTCCATAAAGCCAATGGAGGAGAGGCTTCCATAATGGTAACAAAGGTTGATGAGCCATCAAAATACGGTGTGGTGGTGATGGAGGAGACCACCGGGCAGGTTGAGAAATTTGTTGAAAAACCAAAGTTGTTTGTTGGTAACAAAATCAATGCTGGAATTTACCTGCTGAATCCCTCTGTTTTGGATCGAATTGAACTGAGGCCCACTTCTATCGAAAAAGAGGTGTTTCCAAAGATCGCTGCAGAGAAAAAGCTATTTGCAATGGTCCTGCCAGGATTCTGGATGGACATTGGACAACCAAGGGACTATATTTCTGGCCTGAGGCTTTACCTGGACTCACTGAGGAAGAAGTCTTCTGCTAAGTTGGCCAGTGGCACTCACATTGTGGGGAATGTCATTGTGGATGAGACAGCCAAAATTGGTGAGGGATGTCTCATTGGACCTGATGTCGCTATTGGTCCTGGTTGCATTGTTGAGCCAGGTGTTAGACTCTCCCGCTGCACAGTAATGCGAGGAGCCCGGATTAAGAAGCATGCTTGCATATCCAGCAGTATCATTGGGTGGCATTCCACTGTCGGGCAATGGGCTCGAGTGGAGAATATGACTATCCTGGGAGAAGATGTCCATGTATGTGATGAAATTTACAGCAATGGTGGTGTGGTTTTGCCCCACAAGGAGATCAAGTCAAATATTCTGAAGCCTGAAATAGTCATGTGA 1095 0.4539 MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAAGVTEVVLAINYQPELLQVMLNFLKDFEAKLGIKITCSQETEPLGTAGPLALARDKLIDDSGEPFFVLNSDVISEYPLKEMIEFHKANGGEASIMVTKVDEPSKYGVVVMEETTGQVEKFVEKPKLFVGNKINAGIYLLNPSVLDRIELRPTSIEKEVFPKIAAEKKLFAMVLPGFWMDIGQPRDYISGLRLYLDSLRKKSSAKLASGTHIVGNVIVDETAKIGEGCLIGPDVAIGPGCIVEPGVRLSRCTVMRGARIKKHACISSSIIGWHSTVGQWARVENMTILGEDVHVCDEIYSNGGVVLPHKEIKSNILKPEIVM. 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00939 364 Pfam Bacterial transferase hexapeptide (six repeats) 264 298 IPR001451 -
Seca7g00939 364 Gene3D Hexapeptide repeat proteins 237 361 - -
Seca7g00939 364 CDD M1P_guanylylT_B_like_N 1 237 IPR045233 GO:0004475|GO:0005525|GO:0009298
Seca7g00939 364 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 1 363 - -
Seca7g00939 364 Pfam Nucleotidyl transferase 2 232 IPR005835 GO:0009058
Seca7g00939 364 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 236 IPR029044 -
Seca7g00939 364 FunFam mannose-1-phosphate guanyltransferase beta 1 235 - -
Seca7g00939 364 SUPERFAMILY Nucleotide-diphospho-sugar transferases 1 315 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00939 Seca-Chr7 11861627 11866481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00939 1 164 Eukaryotic Initiation Factors Gene Family AT2G34970 25.824 2.57e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00939 K00966 - aew:130793371 673.7