Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00917 ATGGGACTTCATGGCTTCCCTCAAGATATTAGAAGAACCAGCATAGAGAGCGACATAATCATTGGAGTGATTGATACCGGAATATGGCCTGAGTCAGTTAGCTTTAATGACGAAGGATTTGATGGATTGTATGGAAAAGATGACATCATATCTCCAAGGGATTCGAATGGTCATGGGACTCACTGTGCCTCCACTGCTGCTGGAAACTCAGTTAAATCTGCAAGTTTATTTGGACTTGCTTCAGGGACAGCAAGAGGAGGAGTTCCATCAGCACGTATTGCTGTATACAAATCGTGTTGGTCAGAAGGTTGTGAAGAAGCTGACACCCTTGCAGCATTTGATGAAGCCATTGCAGATGGTGTTGACATCATTTCCCTTTCTCGAAGAGTGGTACACAAAAACTATTTTGAGGACATATATGCCATAGGAGCTTTCCATGCAATGAAGAAAGGCATATTAACATCGACATCTGCTGGTAATTTAGGTCCACAACTTTACTCAAACTCAAAAGTTGCACCATGGTCTTGCCTTGAAGGTTCTTTAGAACAAGATTTGGTAAAGGGAAAGATTGTTCTTTGCGATGTGCTTCGGGGTTCCTCATCAGTGGGACTCGTTTCTGGGGCAGCTGGTATTCTATTTCGTAGTGTCGCTCCACAAGATGTGGCACGTACATTTGCACTGCCAGCGATTCATCTTAGTGAAAACGATGGAAAACTCATACATTCTTACATAAACTCAACAAGTAATCCAACAGCTATAATATTTAAGAGTACTGAAGACAAAGATTCGTTTGCCCCATACATAGCTTCATTCTCATCTAGAGGTCCAAATGCTATCACTCCAGACATTCTCAAGCTGCTGCCTACGTCAAATCATTTCATTCCAATTGCCACCCCTATGAGTGCCACACTTAATCCTGAAGCTGAATTTGCTTATGGTGCGGGGCAAATTAACCCAATTAAGGCAGTGAATCCTGGATTAGTATATGATGCCAGTGAAATCAATTATGTTAAATTTCTATGTGGACAAGGTTATGATACAAAAAAGCTACGAACCATCACAGATGATAATAGCAGTTGCACGTCAACTAATAATGCAACTGTTTGGGACCTCAATCTCCCATCTTTTGCTCTTTCCACAAACGTGTCAAGATCTTTTAGTCGCATTTTCCATAGAGTTGTTACAAATGTTGGATCTGCAACATCAAGGTACAAAGCTAGAATAAACGCACCTCCATCTTTGTTAAATATTAAAGTGGAGCCAGATGTTTTGTCTTTCTCATATGTGGGTGAAAAGAAGTCATTTACTCTAAGGATTGAAGGGAGCATTAATGTGGATATAGTTTCTTCTTCTTTGGTTTGGGATGATGGCATTTTTCAAGTGAGGAGTCCTATTGTTGTTTATGCTAAATAA 1413 0.4041 MGLHGFPQDIRRTSIESDIIIGVIDTGIWPESVSFNDEGFDGLYGKDDIISPRDSNGHGTHCASTAAGNSVKSASLFGLASGTARGGVPSARIAVYKSCWSEGCEEADTLAAFDEAIADGVDIISLSRRVVHKNYFEDIYAIGAFHAMKKGILTSTSAGNLGPQLYSNSKVAPWSCLEGSLEQDLVKGKIVLCDVLRGSSSVGLVSGAAGILFRSVAPQDVARTFALPAIHLSENDGKLIHSYINSTSNPTAIIFKSTEDKDSFAPYIASFSSRGPNAITPDILKLLPTSNHFIPIATPMSATLNPEAEFAYGAGQINPIKAVNPGLVYDASEINYVKFLCGQGYDTKKLRTITDDNSSCTSTNNATVWDLNLPSFALSTNVSRSFSRIFHRVVTNVGSATSRYKARINAPPSLLNIKVEPDVLSFSYVGEKKSFTLRIEGSINVDIVSSSLVWDDGIFQVRSPIVVYAK. 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00917 470 ProSiteProfiles Serine proteases, subtilase domain profile. 1 323 - -
Seca7g00917 470 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 176 285 IPR045051 -
Seca7g00917 470 Pfam Subtilase family 17 284 IPR000209 GO:0006508|GO:0008236
Seca7g00917 470 CDD PA_subtilisin_like 175 254 - -
Seca7g00917 470 Gene3D - 177 261 - -
Seca7g00917 470 Gene3D Peptidase S8/S53 domain 262 285 IPR036852 GO:0004252|GO:0006508
Seca7g00917 470 Gene3D Peptidase S8/S53 domain 46 175 IPR036852 GO:0004252|GO:0006508
Seca7g00917 470 Gene3D Peptidase S8/S53 domain 297 336 IPR036852 GO:0004252|GO:0006508
Seca7g00917 470 Gene3D Peptidase S8/S53 domain 18 41 IPR036852 GO:0004252|GO:0006508
Seca7g00917 470 Gene3D - 340 469 - -
Seca7g00917 470 ProSitePatterns Serine proteases, subtilase family, histidine active site. 58 68 IPR022398 -
Seca7g00917 470 Pfam Fibronectin type-III domain 370 467 IPR041469 -
Seca7g00917 470 PRINTS Subtilisin serine protease family (S8) signature 16 35 IPR015500 -
Seca7g00917 470 PRINTS Subtilisin serine protease family (S8) signature 54 67 IPR015500 -
Seca7g00917 470 SUPERFAMILY Subtilisin-like 13 324 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00917 Seca-Chr7 11620003 11624881 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00917 1 469 Subtilisin-like Serine Gene Family AT3G46850 36.437 2.92e-100 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00917 - - tcc:18585997 465.307