Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00916 ATGGCGGGGACAATGTCTTCCTCTTCTTGGCTTTTCATTTTCAGCCTCATTGGCATCGTGCTAATTACTACTCATGCGGATACTCAAGACAATAGAAAGACTTATATTGTGTATATGGGAAACCAGCCAAGTGAAGATGTTCCCAATTCAATGCTTCACATGAGCATGCTGCAAAAAGCACTTGGCAGCAATAGGGCAGCAGATGCTATGCTCCATAGCTTTAAGAGAAGTATTAATGGCTTTGTTGTGAAGCTCACAAATGAGGAAGTGGAAAAAATTGCAGCATTGGAAGGTGTAGTTTCTGTTTTCTTAAATGGAAAGAAACAACTTCATACAACAAGGTCATGGGACTTCTTAGGCTTTCCTCAACAAGCAACTAGAAGTACTACAGAAAGTGACATAATTATAGGTGTCCTTGATACTGGAATTTGGCCAGACTCTAGTAGCTTTGATGACTCAGGTTTTGGTCCTCCACCTACCAAATGGAAAGGAACCTGTCACAATATCACATGCAACAAAAAAATCATTGGAGCTAAATATTATAGAATTTATGAATTAGAGGGAGATGATATCCAATCTCCAGTAGATTCTAATGGCCATGGAACACACACAGCATCAACAGTTGCAGGAGGTTTAGTTAGCTCAGCAAGCCTAAATGGCCTTGGTTTGGGGACAGCTAGAGGAGGGGTTCCATCAGCAAGAATTGCAGTGTATAAAGTTTGTTGGTCTGATGGTTGTTATGATGCTGACATTCTTGCAGCATTTGATGATGCAATTGCAGATGGTGTTGACATAATTTCTCTTTCAGTAGGAGGCGAAACTGCAAAGGACTATTTTAATGATTCAATTGCTATTGGAGCTTTTCATGCTATGAGAAATGGAATATTAACATCAATGTCTGCTGGGAACAATGGTCCAGATAATGCAACAATCACAAATTTTTCACCTTGGTCTCTTGCTGTAGCTGCTAGCACCATTGACAGAATGTTCTCCACCAAGGTTCAGCTTGGGGACAACCAGATCTATGAGGGAATTTCAATAAATACATATGAACCTAGTGGTAAGCTGTATCCTTTAATTTATGGAAGGGATGCACCAAACACCCTCAAGGGCTTTGATGGCTCCAAATCCAGCCTTTGCTTTGCAAACTCATTGGACCCAGCTTTGGTGAAAAATAAAATTGTTCTTTGTGATGGCTATTTTGGTGCTAAGAATGTTGGACTAGCATCAGGTGCAGCTGGAATTGTAATACACAGAGATGGAATCGAAGATCATGGGAAAGTTTTTGCTTTGCCTGCATCTCACATTAACACTGAGGAGGATGCTAATAGCATCGACACCTACATGAATACAACAAGTAATCCAACTGCAACCATATTGAAGAGCACCACTGGAAATGATACCTTTGCCCCTTATGTTATCTCGTTTTCTTCAAGAGGTCCAAATCCAATTACACTTGACATTCTCAAACCTGATATTGCAGCTCCTGGGGTTGAAATTCTAGCTGCATGGCCTCCAAATGCTCCTCCATCTGGTGTCAAAGGAGACAAGAGACAAGTACAGTATAATATCAAATCAGGAACATCAATGGCATGTCCACATGCTACAGGGGTAGCTGCCTACATCAAATCCTTCCATCCTACTTGGTCTCCTGCAGCAATTAAGTCAGCAATTATGACAACAGCTTTGCCAATGAATCCTAAATATAACCCAGAAGCTGAATTAGCATATGGAGCAGGCCATATTAATCCTTCAATGGCATTGAATCCTGGTTTAGTATATGATGCTAGTGAGTCTGACTATGTGAGCTTCTTATGTGGGCAAGGTTATGACACAATCATGTTACAGAGAGTTACTGGTGATACTAGTACCTGTGTAGGAGTCACTGATGGGAATGTTTGGGATCTGAATTATCCTTCTTTTGCTGTTTCCACAACTTCTGGAGTATCTATCAGCCGTGTTTTCACTAGGACTGTCACAAATGTTGGTTCTCCAACCTCTATATATAAATCTGTTGTGACTGCACCAAAGGGGCTTGAGATCAAAGTGAATCCTTCAAGTATTTCTTTCAGTTCTGTTGGGCAGAAGCAGACCTTTCAGGTCAGAGTTCAGGGAAGCCTAGGCACCAATTTATTAGCTTCTGCTTCTTTGATATGGGATGATGGGAAACACAAAGTGAGGAGTCCCATTACTGTATTTCTGGTTGAATCAAAATAG 2217 0.4091 MAGTMSSSSWLFIFSLIGIVLITTHADTQDNRKTYIVYMGNQPSEDVPNSMLHMSMLQKALGSNRAADAMLHSFKRSINGFVVKLTNEEVEKIAALEGVVSVFLNGKKQLHTTRSWDFLGFPQQATRSTTESDIIIGVLDTGIWPDSSSFDDSGFGPPPTKWKGTCHNITCNKKIIGAKYYRIYELEGDDIQSPVDSNGHGTHTASTVAGGLVSSASLNGLGLGTARGGVPSARIAVYKVCWSDGCYDADILAAFDDAIADGVDIISLSVGGETAKDYFNDSIAIGAFHAMRNGILTSMSAGNNGPDNATITNFSPWSLAVAASTIDRMFSTKVQLGDNQIYEGISINTYEPSGKLYPLIYGRDAPNTLKGFDGSKSSLCFANSLDPALVKNKIVLCDGYFGAKNVGLASGAAGIVIHRDGIEDHGKVFALPASHINTEEDANSIDTYMNTTSNPTATILKSTTGNDTFAPYVISFSSRGPNPITLDILKPDIAAPGVEILAAWPPNAPPSGVKGDKRQVQYNIKSGTSMACPHATGVAAYIKSFHPTWSPAAIKSAIMTTALPMNPKYNPEAELAYGAGHINPSMALNPGLVYDASESDYVSFLCGQGYDTIMLQRVTGDTSTCVGVTDGNVWDLNYPSFAVSTTSGVSISRVFTRTVTNVGSPTSIYKSVVTAPKGLEIKVNPSSISFSSVGQKQTFQVRVQGSLGTNLLASASLIWDDGKHKVRSPITVFLVESK. 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00916 738 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 136 146 IPR023827 -
Seca7g00916 738 Pfam Subtilase family 132 580 IPR000209 GO:0006508|GO:0008236
Seca7g00916 738 ProSiteProfiles Serine proteases, subtilase domain profile. 115 588 - -
Seca7g00916 738 CDD Peptidases_S8_3 108 562 IPR034197 -
Seca7g00916 738 Pfam Fibronectin type-III domain 635 732 IPR041469 -
Seca7g00916 738 ProSitePatterns Serine proteases, subtilase family, serine active site. 527 537 IPR023828 -
Seca7g00916 738 Gene3D Peptidase S8/S53 domain 133 601 IPR036852 GO:0004252|GO:0006508
Seca7g00916 738 Gene3D - 327 466 - -
Seca7g00916 738 PRINTS Subtilisin serine protease family (S8) signature 526 542 IPR015500 -
Seca7g00916 738 PRINTS Subtilisin serine protease family (S8) signature 196 209 IPR015500 -
Seca7g00916 738 PRINTS Subtilisin serine protease family (S8) signature 131 150 IPR015500 -
Seca7g00916 738 CDD PA_subtilisin_like 334 459 - -
Seca7g00916 738 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 111 IPR037045 -
Seca7g00916 738 FunFam Subtilisin-like protease SBT1.5 133 339 - -
Seca7g00916 738 Pfam Peptidase inhibitor I9 34 110 IPR010259 -
Seca7g00916 738 Gene3D - 605 734 - -
Seca7g00916 738 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 35 732 IPR045051 -
Seca7g00916 738 SUPERFAMILY Subtilisin-like 110 592 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00916 Seca-Chr7 11522412 11528578 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00916 30 733 Subtilisin-like Serine Gene Family AT5G59120 48.954 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00916 - - vvi:100259879 920.613