Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00900 ATGCATGACAATCAACCAACCATATTTGTTGTTAACAATAACAACATTGAATTAGTCATTTTAGCAGGCCTTTTTTCTGAACATTTGCTAATGTTGTCATTCTTTTTCTTATGTATCATCAGGCTTTACGTTAGAGGTTCAATTCTTGGGTACAAGAGATCCAAGTCAAATCAATACCCAAACACCTCTCTTATCCAGATTGAGGGAGTAAACTCCAAGGAAGAGGTCTCATGGTACAGTGGGAAGCGTATGGCATACATTTACAAAGCCAAGGTAAAGCAGAATGGAACTCATTATCGCTGCATTTGGGGTAAGGTTATCAGGCCTCATGGTAACAGTGGTATAGTCCGTGCTAAGTTCAAGTCGAATCTGCCACCAAAATCAATGGGAGCAAGAGTACGGGTCTTTATGTATCCAAGCAACATATGA 429 0.3963 MHDNQPTIFVVNNNNIELVILAGLFSEHLLMLSFFFLCIIRLYVRGSILGYKRSKSNQYPNTSLIQIEGVNSKEEVSWYSGKRMAYIYKAKVKQNGTHYRCIWGKVIRPHGNSGIVRAKFKSNLPPKSMGARVRVFMYPSNI. 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00900 142 ProSitePatterns Ribosomal protein L35Ae signature. 104 125 IPR018266 GO:0003735|GO:0005840|GO:0006412
Seca7g00900 142 Hamap 50S ribosomal protein L35Ae [rpl35ae]. 44 136 IPR001780 GO:0003735|GO:0005840|GO:0006412
Seca7g00900 142 FunFam 60S ribosomal protein L35a 38 142 - -
Seca7g00900 142 Gene3D translation elongation factor selb, chain A, domain 4 39 142 IPR038661 -
Seca7g00900 142 Pfam Ribosomal protein L35Ae 42 136 IPR001780 GO:0003735|GO:0005840|GO:0006412
Seca7g00900 142 SUPERFAMILY Translation proteins 42 136 IPR009000 -
Seca7g00900 142 PANTHER 60S RIBOSOMAL PROTEIN L35A 40 142 IPR001780 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00900 Seca-Chr7 11031177 11035121 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00900 40 142 Cytoplasmic Ribosomal Protein Gene Family AT1G07070 86.408 8.34e-67 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00900 K02917 - oeu:111397835 209.92