Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00872 ATGTCCGACGCTCTGATCAATGGACTGGCTGGCGCTGGAGGAGGGATCATTGCCCAACTCATTACCTACCCTCTTCAAACTGTAAACACTCGTCAACAAACCGATCGTGATCCGAAGAAGGACAACAGGAATCTAGGAACTTTCCAGCAAATGTGCCAGGTTGTGAATCAAGAGGGGTGGGAGCGGTTGTATGGAGGCTTGATGCCATCGCTAGTAGGTACCGCTGCGTCTCAGGGTGTTTATTATTATTTCTATCAAATATTCAGGAACAAAGCTGAAACAGCTGCATTAGAAAAGAAAATGCTAGGCATTGGTGATGGATCAGTTGGGATGTTCTCCTCACTTATTGTTGCTGCTTTATCGGGGTGTGTTAATGTGCTCTTGACAAATCCCATATGGGTAGTTGTTACCCGCATGCAGACACATAGAAAAGAGTCAAGCAGAAGTCTCCCTGATCAGGGGTTGTCAAATGCCCTTGGACAAACAATGCTTTCTACTGTTGAGCCTCTTGCTTATGGAACTAGCCATGTGATTCAAGAAGTTTATGATGAAGCTGGAGTTTGGGGTTTCTGGAAAGGTGTATTACCAACATTGATTATGGTGAGCAATCCTTCCATACAGTTCATGCTGTATGAAACCATGTTGGCAAAGTTAAAAAAAAGGCGTGCTCGGAGTAAGAAGGATAGCACTGGGGTAACTGCTTTGGAGATATTTCTTCTTGGAGCTTTGGCTAAGCTTGGAGCTACTGTTGTAACTTATCCTCTTCTAGTTGTGAAGGCAAGGCTTCAAGCTAGGCAGGTTAAAAGTGCAGACAAGAGACACCAATATAAAGGTTTAAGTTGTGATGATCTTTTCTTATTCATAATCCCATTAAAATGCATTTTATCTGTACTTTTGATCTCGGTTGCCAAACGTGAGGTTATGAACCCTGTAACATATACTTACTAG 948 0.4293 MSDALINGLAGAGGGIIAQLITYPLQTVNTRQQTDRDPKKDNRNLGTFQQMCQVVNQEGWERLYGGLMPSLVGTAASQGVYYYFYQIFRNKAETAALEKKMLGIGDGSVGMFSSLIVAALSGCVNVLLTNPIWVVVTRMQTHRKESSRSLPDQGLSNALGQTMLSTVEPLAYGTSHVIQEVYDEAGVWGFWKGVLPTLIMVSNPSIQFMLYETMLAKLKKRRARSKKDSTGVTALEIFLLGALAKLGATVVTYPLLVVKARLQARQVKSADKRHQYKGLSCDDLFLFIIPLKCILSVLLISVAKREVMNPVTYTY. 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00872 315 SUPERFAMILY Mitochondrial carrier 3 278 IPR023395 -
Seca7g00872 315 Gene3D Mitochondrial carrier domain 103 289 IPR023395 -
Seca7g00872 315 Pfam Mitochondrial carrier protein 234 290 IPR018108 -
Seca7g00872 315 Pfam Mitochondrial carrier protein 7 90 IPR018108 -
Seca7g00872 315 Pfam Mitochondrial carrier protein 109 220 IPR018108 -
Seca7g00872 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 91 IPR018108 -
Seca7g00872 315 Gene3D Mitochondrial carrier domain 2 102 IPR023395 -
Seca7g00872 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 217 IPR018108 -
Seca7g00872 315 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 1 279 IPR044712 GO:0006862|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00872 Seca-Chr7 10674517 10681793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00872 24 274 Chloroplast and Mitochondria Gene Families AT1G25380 28.295 3.61e-19 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00872 K13354 - gmx:100775784 442.195