Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00869 ATGCCTTCTTCTGCTCCCATCTTGCTCTCAAAATGCACTGTCTTCCCAGACCAAAAGTCCACTCTCGGTACTCTCAAACTCTCCGTTTCAGACCTACCCATGCTTTCTTGCCACTACATCCAAAAGGGTTGCCTCTTCACACAACCTTCCATCCCATTCCACACTCTCATACAGCTCCTTAAATCTGCACTCTCTCACACTCTCTCCCTCTTTCCCCCTCTCGCTGGCCGACTCACCACCGATTCCGACGGTTACGTCTACCTCACCTGCAACGACGCCGGCGTCGATTTCCTCCACGCCACTGCCACCGGCCTCTACATCCATGACCTCCTGTCCCCTACCGATGTCCATGAGTCCTTCAAGGAATTCTTCACCTTCAACAGGAAAGTCAGTTACACCGGCCATTCCTCGCCGATTTTGGCCGTTCAGGTCACCGAACTCGCCGATGGCGTCTTCATTGGCTGCGCCGTCAACCACGCCGTCACTGACGGAACCTCCTTCTGGAATTTCTTCAACACATTCGCGCAAGTCTGTAGAGGAGCCAACCAGTGCCTCCGCAACGTGCCGGACTTTCGCCGCGAGTCTATTCTGATCTCGAACGCCGTTCTCCGGTTGCCGGAAGGAGGCCCTGTAGTGACGTTCAACGCCGACGCGCCGTTGCGCGAGAGGATTTTCAGCTTCAGCCGCGAAGCAATTCAGAGGCTGAAAGCCAAAGCCAACAACTGGCGGTTAACGGAGGCGAACAACGCCGCTGAGTTGATGATGAAGCAAAGCAACGATCACCACAACCAGCAGAAGGAAAACAACAACGGCAAGGTTGCAACAATCTTCGAGAGCTTGTTCAAGAGCGCCGTTAATTCCAAACAGCAAACGGTTACAGCAACTGAAACGGTGGTTGAGATTTCGTCGTTTCAGTCGGTGTGCGCGTTGCTCTGGCGCGCAGTAACGCGTGCGAGGAAGTTCCCGGCGTCGAAAACGACGACGTTTAGAATGGCAGTGAACTGTCGCCACCGGATAGAGCCGAAATTGGAACCGTACTATTTTGGAAATGCGATCCAGAGCGTGCCGACGTACGCTTCTGCAGGAGACGTGCTGTCTAGGGACCTACGGTGGTGCGCGGAGCAGCTGAACAAGAACGTGAAGGCGCACGATAACGCTATGGTGCTCCAGTTCGTAAATGATTGGGAGAAGAACCCAAGGTGCTTCCCGTTGGGGAACCCTGACGGTGCATCGATAACCATGGGTAGTTCACCGAGGTTCCCAATGTACGACAACGATTTTGGATGGGGAAGGCCGTTGGCGGTGCGGAGTGGAAAGGCGAACAAATTTGACGGCAAGATCTCGGCGTTTCCCGGCAGAGATGGAAGCGGCACCGTTGATTTGGAGGTTGTTTTGGCGCCCGAAACCATGGCAGGACTGGAGTCTGACCCCGAGTTCATGCTATACGCCACGAGTCAGTTATGA 1464 0.5451 MPSSAPILLSKCTVFPDQKSTLGTLKLSVSDLPMLSCHYIQKGCLFTQPSIPFHTLIQLLKSALSHTLSLFPPLAGRLTTDSDGYVYLTCNDAGVDFLHATATGLYIHDLLSPTDVHESFKEFFTFNRKVSYTGHSSPILAVQVTELADGVFIGCAVNHAVTDGTSFWNFFNTFAQVCRGANQCLRNVPDFRRESILISNAVLRLPEGGPVVTFNADAPLRERIFSFSREAIQRLKAKANNWRLTEANNAAELMMKQSNDHHNQQKENNNGKVATIFESLFKSAVNSKQQTVTATETVVEISSFQSVCALLWRAVTRARKFPASKTTTFRMAVNCRHRIEPKLEPYYFGNAIQSVPTYASAGDVLSRDLRWCAEQLNKNVKAHDNAMVLQFVNDWEKNPRCFPLGNPDGASITMGSSPRFPMYDNDFGWGRPLAVRSGKANKFDGKISAFPGRDGSGTVDLEVVLAPETMAGLESDPEFMLYATSQL. 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00869 487 Gene3D - 219 478 IPR023213 -
Seca7g00869 487 Gene3D - 7 204 IPR023213 -
Seca7g00869 487 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 480 - -
Seca7g00869 487 Pfam Transferase family 10 480 - -
Seca7g00869 487 SUPERFAMILY CoA-dependent acyltransferases 35 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00869 Seca-Chr7 10561427 10562890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00869 58 474 Monolignol Biosynthesis Gene Families AT5G48930 27.040 6.62e-33 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00869 - - gmx:100779616 790.415