Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00857 ATGGTTACTTCTCTTTCATTGGCCATCTCATACCCAACACTTGGAGCTGCACCACATATGTTTGTCAAAGGTTATAAGAACATTCTTGTTGTCTCTGTTGACACAGAGTATTCTTTCCCACAATCAGATAAGGTCAATGAGTATCTCAAGAAACACAAGAGAATCCTGCAAGGAACTGCAGAAGAAATCTGTGTACTAGCTGAGCTGTTGAAGCTACAAAAGAACATTATGGAATGTCCTGCATGCATGCCATTGCAGCATTGGCACACAGGGGGAAAACCAGAGGATTACTGCCATGGATGGTTGACAATGGCATCCATTAATGCTACCTATGCTCACCATGTTAAACCTTTGCAAGGGGAACAATTTTGGCAGAAGACAAATCAGCTACCACCACTGCCACCACCAATGAAGAGGGCTCCAGGCAGACCCAAAAAATAG 441 0.4354 MVTSLSLAISYPTLGAAPHMFVKGYKNILVVSVDTEYSFPQSDKVNEYLKKHKRILQGTAEEICVLAELLKLQKNIMECPACMPLQHWHTGGKPEDYCHGWLTMASINATYAHHVKPLQGEQFWQKTNQLPPLPPPMKRAPGRPKK. 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00857 146 MobiDBLite consensus disorder prediction 127 146 - -
Seca7g00857 146 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00857 Seca-Chr7 10329923 10335235 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00857 1 50 Cytoplasmic Ribosomal Protein Gene Family AT3G09200 70.000 1.75e-19 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00857 K02941 - vvi:100250067 87.4261