Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00851 ATGGTGAGGTTCCCACAGGATGTGTCTTCAATAACAACAGCAATTTCACTCACTGGAAATAAGGATCTTTGTGGGGGAATACCTCAACTGAAGATGTCTGCATGCTCTATGTCTCCTTCAAAGAAACACAACAAGAGATCTCATAAAAAGAAAGTTATCCTCATCATTTTAATTGGTGGGGTTTTTATGTCTTGTATAGTTTTTATCAGTGTCTATTGTCTCAAGAAAAAGCCCAAGGAGTTATCTTCTTTACCAGCTCTTCAAAATAGGTACTTGAAGGTTTCTTATGGAGAGCTACATCAAGCAACCAATGGATTTTCTTCATCCAATTTAGTAGGCACAGGAGGCTTTGGTTCTGTGTTCAAAGGATCTCTTCTCCATTTTGAAAGACCTATTGGAGTAAAGGTGTTGAATCTTGAAACACGCAGGGCTTCAAAGAGTTTCACTGTTGAATGCAAAGCTCTGGGACAGATCAAACACCAGAATCTTCTCAATGTCTTGACTTGTTGTTCAAGTGTTGATTATAATGGTGAAGATTTCAAGGCTAGAGTTTATGAGTTCATGCCTAATGGGAATCTAGAAAGCTTGTTGCATGGCAATGACCAGGTTGAGTCTAGAAATCTAAATCTCAACCTTACACAAAGGATGAATATTGCTCTTGATGTAGCTCAGGCATTGGATTATCTTCACAATGATTCAGAGGAAGGTGTAGTTCACTGTGACATTAAGCCAAGCAACGTTCTTCTTGATGATGACATTGTTGCCCACTTGGGAGACTTTGGGTTAGCTAGGCTCCTTCATGTGACTATGGGGCACTCAAGTAGAGATCAAGTTAGTTCCTCTGCAATTAAGGGAACTATTGGATATGTTCCCACAGATCAGAGTTGTAAATGTTGA 897 0.3946 MVRFPQDVSSITTAISLTGNKDLCGGIPQLKMSACSMSPSKKHNKRSHKKKVILIILIGGVFMSCIVFISVYCLKKKPKELSSLPALQNRYLKVSYGELHQATNGFSSSNLVGTGGFGSVFKGSLLHFERPIGVKVLNLETRRASKSFTVECKALGQIKHQNLLNVLTCCSSVDYNGEDFKARVYEFMPNGNLESLLHGNDQVESRNLNLNLTQRMNIALDVAQALDYLHNDSEEGVVHCDIKPSNVLLDDDIVAHLGDFGLARLLHVTMGHSSRDQVSSSAIKGTIGYVPTDQSCKC. 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00851 298 Pfam Protein kinase domain 108 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g00851 298 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672|GO:0006468
Seca7g00851 298 SMART serkin_6 106 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g00851 298 ProSiteProfiles Protein kinase domain profile. 106 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g00851 298 PANTHER OS04G0122200 PROTEIN 14 291 - -
Seca7g00851 298 FunFam LRR receptor-like serine/threonine-protein kinase EFR 77 187 - -
Seca7g00851 298 SUPERFAMILY Protein kinase-like (PK-like) 80 291 IPR011009 -
Seca7g00851 298 Gene3D Transferase(Phosphotransferase) domain 1 188 296 - -
Seca7g00851 298 Gene3D Phosphorylase Kinase; domain 1 68 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00851 Seca-Chr7 10231683 10232684 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00851 13 293 Receptor kinase-like Gene Family AT3G47570 46.575 3.88e-78 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Seca7g00851 Pkinase 1.8e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00851 - - ccaj:109813865 390.578