Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00850 ATGATGGCTTTTATCACCATTTTTCTTCTCTGTTTAGCTTCACAAATCTTGGTCTACAACTTGCCCTCAGCAACACTTGCTCTGGTTCTGAAATCAGAGACTGATAAACTCGCTTTGCTTGATTTAAAAGAGAAGCTAACCAATGGCATGCCTGATTCTCTGCCATCATGGAATGAATCTCTGCATTTCTGTGAATGGCAGGGTGTTACATGTGGTCATAGACACATAAGAGTCACTTCCTTGCATTTGGAAAATGAAGACTGGGGTGGTACTCTTGGACCAGCCTTGGCAAATCTAACCTTCCTCAAAATGCTCAAACTCTCAAACATCAACTTGCATGGTCAAATTCCAACACAAATTGGTCGTTTGAAAAGGTTGCAGGTTCTTGACTTAAGCACGAACAATCTTGAGGGAGAGGTTCCTATGGAGCTTACTAACTGCACCAATCTCCAGGTAATTAGCTTGTTCTACAATCAACTCACTGGAAAAGTTCCCTCATGGTTTGGATCTATGATTCAGCTTACTAAGTTACTTCTTGGTTCCAATAATCTAGTTGGTACTATCCCACCTTCTTTGGGAAATATTTCATCATTAGAGAATATAACACTTGCAAGAAATCAATTGGAAGGAAGCATACCTTATGCTTTGGGTAGGTTGTCAAATTTGAAAAAGCTGAATCTGGCTTCAAATAATTTGACAGGTATAATCCCTCATTCTCTCTACAACCTTTCAAATATTAAAGATTTTATTCTGGCGGAAAACCAGTTATCAGGTACTCTTCCATCCAATATACATCTTGCTTTTCCCAATCTTCAAGCATTCTTGGTTGGAGGGAACCACTTCACTGGTGCCTTCCCGTCTACTATATCCAACATCACAGGATTAAAATGGTTTGATATATCCTCAAATGGTTTTCATGGGTCAATACCTCCTACTTTGGGAAGTTTAAACAAACTTAAGAGGTTTCACATTGGTTATAATAACTTTGGGAGTGGAAGAGCTCATGACTTGGATTTCCTTTCCTCCGTAACCAATTGTACTCAATTGCAAATACTTATTTTGGATGACAATAGATTTGGTGGTGTGTTGCCAGATCTTATTGCCAACTTATCTACCCATCTCAATTTGCTTAGTATGGCGAGGAATCAAATATCTGGAGTGATACCTGAAGGAATTGGACAACTAATCGGTTTAACTGAATTTGATATGAGGGATAATTTGCTTGAGGGAACAATTCCAGATTCAATTGGAAAGCTTAAGAATCTAGGGAGAATATTCTTGTATGAAAACAAATTATCTGGTAATATTCCTGCTGTTATTGGCAATCTCACTATGTTGTCTGAACTTTATTTGCTCAGCAATGAATTTGAAGGAAGCATTCCATTTACCCTCAGATACTGCACACTATTGCAGACAATTAATTTTCATGGGAACAACTTAAGTGGTGATATTCCTATTCAAACATTTGGCCACCTAGAAGGTTTGATAAATCTTGACTTGTCCAACAACTCTTTAACCGGTTCCATTCCTTTAGAGTTTGGTGAGTTGAAGCATCTTTCCGCATTATATCTACTCCAAAACAAGTTGTCTGGTGAAATTCCAAAGGAACTTGGTGCTTGTTTGGTATTAACAGAGCTGGTTCTGGAGAGAAACTTTTTCTATGGAAGTATACCTTCCTTTTTGGGCTCTTTAAGTTCCCTTGAACTCTTGGATCTTTCTTACAACAATTTCTCAAGCACAATCCCCCCTGAACTAGAAAATCTGACATTTCTTAATGCTCTGGACTTGTCCTTTAACCAACTCTATGGTAAGGTTCCCACAGGAGGTGTCTTCAAAAATGTCACAGCAATTTCACTAAATGGAAATAAGGATCTTTGTGGGGGAATACCTCAACTGAAGCTGCCTGCATGCTCTATGTCTCCTTCAAAGAAACACAACAAGAGGTCTCTTCAAAAGAAACTTATCCTCATCATTGTAATTGGTGGGTTTTTTATGTCTTGTATAGTTCTTATCAGCATCTATTATCTCAAGAAAAAGCCCAAGGAGTTATCTTCTTTACCATCTCTTCAAAATAGGTACTTGAAGGTTTCTTATGGAGAGCTACATGAAGCAACCAATGGATTTTCTTCATCCAATTTAGTAGGCATTGGAGGCTTTGGTTCTGTATACAAAGGATCTCTTCTCCATTTTGAAAGACCTATTGCAGTAAAGGTGTTGAATCTTGAAACACGTGGGGCATCAAAGAGTTTCACTGCTGAATGCAAAGCTCTGGGACAGATCAAGCACCGGAATCTTCTCAATATCTTGACTTGTTGTTCAAGTGTTGATTATCATGGTGAAGATTTCAAGGCTATAGTTTATGAGTTCATGCCTAATGGGAGTCTAGAAAGCTTGTTACATAGCAATGATAGACATGAGGCTAGAAATCTAAATCTCAACCTTACACAAAGGATGAATATTGCTCTTGATGTAGCTCAGGCATTGGATTATCTTCACAATGATTCAGAGGAAGGTGTAGTTCACTGTGACATTAAGCCAAGCAACGTTCTTCTTGATGATGACATTGTTGCCCACTTGGGAGACTTTGGGTTAGCTAGGCTCCTTCATGTGACTATGGGGCACTCAAGTAGAGATCAAGTTAGTTCCTCTGCAATTAAGGGAACTATTGGATATGTTCCCCCAGAGTATGGAGCAGGCGGCCCAGTAACACCACAAGGAGATATCTACAGCTACGGAATTCTTCTGTTGGAGATGCTCACCGGAAAGAAACCTACAGATAGCATGTTTGGTGAGGATCTAAGCTTACACAAGTTCTGTAAGATGGCAATGCCGGAAGGAATCACTGAGATAGTGGATCCACGTTTGCTTATTCCATTTGCTCAAGAACAGACAGGGGTTGTGGAAAACAACAACAAGGAGTGTTTGGTGTCCTTTGCTAGAATTGGAGTTGCATGTTCAGAGGATTTCCCTGCTGAACGAATGCACATAAAAGATGTTATAATGGAGTTACATGCAGTTAAACAAAAGCTGCCCCGCTAG 3039 0.3939 MMAFITIFLLCLASQILVYNLPSATLALVLKSETDKLALLDLKEKLTNGMPDSLPSWNESLHFCEWQGVTCGHRHIRVTSLHLENEDWGGTLGPALANLTFLKMLKLSNINLHGQIPTQIGRLKRLQVLDLSTNNLEGEVPMELTNCTNLQVISLFYNQLTGKVPSWFGSMIQLTKLLLGSNNLVGTIPPSLGNISSLENITLARNQLEGSIPYALGRLSNLKKLNLASNNLTGIIPHSLYNLSNIKDFILAENQLSGTLPSNIHLAFPNLQAFLVGGNHFTGAFPSTISNITGLKWFDISSNGFHGSIPPTLGSLNKLKRFHIGYNNFGSGRAHDLDFLSSVTNCTQLQILILDDNRFGGVLPDLIANLSTHLNLLSMARNQISGVIPEGIGQLIGLTEFDMRDNLLEGTIPDSIGKLKNLGRIFLYENKLSGNIPAVIGNLTMLSELYLLSNEFEGSIPFTLRYCTLLQTINFHGNNLSGDIPIQTFGHLEGLINLDLSNNSLTGSIPLEFGELKHLSALYLLQNKLSGEIPKELGACLVLTELVLERNFFYGSIPSFLGSLSSLELLDLSYNNFSSTIPPELENLTFLNALDLSFNQLYGKVPTGGVFKNVTAISLNGNKDLCGGIPQLKLPACSMSPSKKHNKRSLQKKLILIIVIGGFFMSCIVLISIYYLKKKPKELSSLPSLQNRYLKVSYGELHEATNGFSSSNLVGIGGFGSVYKGSLLHFERPIAVKVLNLETRGASKSFTAECKALGQIKHRNLLNILTCCSSVDYHGEDFKAIVYEFMPNGSLESLLHSNDRHEARNLNLNLTQRMNIALDVAQALDYLHNDSEEGVVHCDIKPSNVLLDDDIVAHLGDFGLARLLHVTMGHSSRDQVSSSAIKGTIGYVPPEYGAGGPVTPQGDIYSYGILLLEMLTGKKPTDSMFGEDLSLHKFCKMAMPEGITEIVDPRLLIPFAQEQTGVVENNNKECLVSFARIGVACSEDFPAERMHIKDVIMELHAVKQKLPR. 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00850 1012 FunFam Leucine-rich repeat receptor-like protein kinase 32 189 - -
Seca7g00850 1012 SUPERFAMILY L domain-like 33 329 - -
Seca7g00850 1012 Gene3D Ribonuclease Inhibitor 335 646 IPR032675 -
Seca7g00850 1012 ProSitePatterns Serine/Threonine protein kinases active-site signature. 839 851 IPR008271 GO:0004672|GO:0006468
Seca7g00850 1012 SUPERFAMILY Protein kinase-like (PK-like) 681 1003 IPR011009 -
Seca7g00850 1012 SMART serkin_6 708 1007 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g00850 1012 Pfam Leucine rich repeat N-terminal domain 33 71 IPR013210 -
Seca7g00850 1012 ProSitePatterns Protein kinases ATP-binding region signature. 714 737 IPR017441 GO:0005524
Seca7g00850 1012 ProSiteProfiles Protein kinase domain profile. 708 1007 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g00850 1012 SUPERFAMILY L domain-like 372 627 - -
Seca7g00850 1012 ProSiteProfiles Leucine-rich repeat profile. 221 242 IPR001611 GO:0005515
Seca7g00850 1012 Gene3D Ribonuclease Inhibitor 196 334 IPR032675 -
Seca7g00850 1012 Gene3D Transferase(Phosphotransferase) domain 1 790 1011 - -
Seca7g00850 1012 FunFam Leucine-rich repeat receptor protein kinase EMS1 190 283 - -
Seca7g00850 1012 SMART LRR_typ_2 395 419 IPR003591 -
Seca7g00850 1012 SMART LRR_typ_2 219 242 IPR003591 -
Seca7g00850 1012 SMART LRR_typ_2 564 587 IPR003591 -
Seca7g00850 1012 SMART LRR_typ_2 123 147 IPR003591 -
Seca7g00850 1012 SMART LRR_typ_2 171 195 IPR003591 -
Seca7g00850 1012 SMART LRR_typ_2 492 516 IPR003591 -
Seca7g00850 1012 SMART LRR_typ_2 588 613 IPR003591 -
Seca7g00850 1012 PANTHER OS04G0122200 PROTEIN 217 1007 - -
Seca7g00850 1012 Gene3D Ribonuclease Inhibitor 32 190 IPR032675 -
Seca7g00850 1012 FunFam LRR receptor-like serine/threonine-protein kinase EFR 679 789 - -
Seca7g00850 1012 Pfam Protein kinase domain 710 942 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g00850 1012 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 790 1012 - -
Seca7g00850 1012 Gene3D Phosphorylase Kinase; domain 1 671 789 - -
Seca7g00850 1012 FunFam LRR receptor-like serine/threonine-protein kinase EFR 335 643 - -
Seca7g00850 1012 Pfam Leucine rich repeat 197 256 IPR001611 GO:0005515
Seca7g00850 1012 Pfam Leucine rich repeat 543 601 IPR001611 GO:0005515
Seca7g00850 1012 PRINTS Leucine-rich repeat signature 495 508 - -
Seca7g00850 1012 PRINTS Leucine-rich repeat signature 564 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00850 Seca-Chr7 10219544 10223093 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00850 33 1010 Receptor kinase-like Gene Family AT3G47570 45.096 0.0 805
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Seca7g00850 Pkinase 1.2e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00850 - - gmx:100777490 1435.62