Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00849 ATGATGGCTTTTATCACCATTTTTCTTCTCTGTTTAGCTTCCCAAACCTTGCTCTACAACTTGCCCTCAACAACACTTGCTCTGGTTCTGAAATCAGAGACTGATAAACTCGCTTTGCTTGATTTGAAGGAAAGGCTAACCAATGGCATGCCTGATTCTCTGCCATCATGGAATGAATCTCTTCATTTCTGTGAATGGGAGGGTGTTACATGCGGTCATCGCCACATGAGAGTCACTGCCTTGCATTTGGAAAATGAAGACTGGGGTGGTACTCTTGGACCAGCTTTGGCAAATCTAACCTTCCTCAAAATGCTCAAACTTTCAAACATCAACTTGCATGGTCAAATTCCAACACAAATTGGTCGTTTAAAAAGGTTGCAAGTTCTTGACTTAAGAAGGAACAATCTTGAGGGAGAGGTTCCTATGGAGCTTACCAACTGCACCAGCCTCCAGGTAATTAATTTGTTGTACAATCAACTCACTGGAAAAGTTCCCTCATGGTTTGGATCTATGATTCATCTTACTAAGTTGCTTCTTGGTGCCAATAATCTAGTTGGTACTATCCCACCTTCCTTGGGAAATATTTCATCACTAGAGAATATAACACTTGCAAGAAATCAATTGGAAGGAAGCATACCTTATGCTTTGGGTAGGTTGTCAAATTTGAAAGAGCTGAATCTGGGTTTAAATAATTTGTCAGGTATAGTCCCCCATTCTCTCTACAACCTTTCAAATATTCAAGTTTTGGTCCTCGCGAAAAACCAGTTATTCGGTACTCTTCCATCAAATATGCATCTTGCTTTTCCCAATCTCCAAGCATTCTTGGTAGGATGGAACCAGTTAACCGGGACTTTCCCGTCTTCAATATCCAACATCACTGGATTAAAATGGTTTGATATATCCACAAATGGTTTTCATGGGTCAATACCTCCTACTTTGGGAAGCTTAAACAACCTTCGGAGGTTCAATATTGGTTATAATAATTTCGGGAGTGGAACAACTCACGACTTGGATTTCTTTTCCTCATTAACCAATTGTACTCAATTGCGAATACTTAATTTAGATAACAATAGATTTGGTAGTGTGTTGCCAGATCTTATTGGCAACTTCTCTACACATCTCAATTTGCTTACAATGGCGAGGAATCAAATATCTGGAGTGATACCTGAAGGAATTGGACAACTAATCGGTTTAACTTCCTTTGTTATGATAGAGAATTTCCTTGAGGGAACAATTCCAGATTCAATTGGAGAGCTTAAGAATCTAGGAAGATTGGCCTTGCAAGACAACAAATTATCTGGTAAAATTCCTGCTGTTATTGGCAATCTTACTATGTTGTCTGAACTTTATCTTCACACCAATAAATTTGAAGGAAGCATTCCGTTTACCCTTAGATACTGCACACAGTTGCAGTCATTTGGTGCTTGTGACAACAACTTAAGTGGTGATATACCTAATCAAACATTTGGCTATCTAGAAAGCTTAATAGTGCTTGACTTGTCCAATAATTCCTTATCTGGTCCCATTCCTTCGGAGTTTGGTAACTTGAAGCAGCTTTCCATATTATATCTAAGCGCAAACAAGCTGTCTGGTGAAATTCCAAAGGAACTTGGTGCTTGTTTGGCATTAACAGAGCTCATGCTGGATAGAAACCTTTTCCGTGGAAGTATCCCCTCCTTCTTGGGCTCTTTCAGATCCCTCGGAATCTTAAACCTTTCTAGCAACAACTTCGCAAGCACAATCCCCCCTGAACTAGAAAATCTAACATTGCTGAATTCTTTGGACTTGTCTTTTAACCATCTCTATGGTGAAGTTCCCACAGGAGGTGTCTTCAATAACGTCACAGCAATTTCACTCATTGGAAATAAGGATCTTTGTGGGGGGATACCTCAACTGAAGTTGCCTGCATGCTCTACGTCTCCTTCAAAGAAACACAAGACGTCTCTTGAGAAGAATGTTATCCTTATCACTGTAGCTGGCGGGGTTTTGATGTCTTTAATAGTATTTATCAGTATCTATTATCTCAGAAAAAAGGCCAAAACATTATCTTCTTTACCATTTCTTCAAAATAGGTACTTGAAGGTTTCTTATGGAGAGCTACATGAAGCAACCAATGGATTTTCTTCATCCAATTTAGTAGGCACAGGAAGCTTTGGTTCTGTATACAAAGGATCTCTTGTCCATTTTGAAGGACCTATTGCAGTAAAGGTGTTGAACCATGAAACACGTGGGGCATCCAAGAGTTTCGTTGCTGAATGCAAAGTTCTGGAAAAGATGAAGCACCAAAATCTTCTCAAGCTCCTGACATTTTGTTTAAGTGTTGATTATAACGGGGAAGTTTTCAAGGCTCTAGTTTTTGAGTTCATGCCTAATGGGAGTCTAGAAAGCTTGTTACACAGCAGTGAACATGAGTCGAGAAATTTAAATCTCAACCTTACACATAGATTGAATATTGCTCTTGATGTAGCTCAGGCATTGGATTATCTTCACCATAATTCCGAGCAAGCTGTAGTTCACTGTGATATTAAGCCGAGCAACATTCTTCTTGATGATCACATTGTTGCCTACTTGGGAGACTTTGGGTTAGCCAGGTTCCTTCATGAAGCCACGGGGCATTCCAGTAAAGATCAAGTTAGTTCCTTTGCGATTAAGGGAACCATTGGATATGTTGCCCCAGCGACAATTTTATTGCCATTTACATTACATAGAGTATGGAGTAGGTGGTCCAGTATCGCCACAAGGAGATATCTTTTCAGTTATGGAATTCTTCTGTTGGAGATGCTCACCGGAAAGAGACCAACAGATAGCATGTTTGGTGAAGGTCTAAGCCTACACAAGTTCTGTAAGATGGCAATTCCAGAACGAATCACTGAGATAGTGTATTGGCGTTTGCATAGCCCATTTGCTGGAGAAGGGACAGGGGCTATGGAAGAAAACATCAGGGAGTGTCTGGTGTCCTTTGCTAGGATTGGAATTGCATGTTCTGCAGAATTCCCAACTCAGCGAATGGACATAAAAGAGGTCATTGCGGAGCTGCACGCAATTAAACAGAAGATTCCACCCCAGGAACCATTGCTGTGA 3081 0.4041 MMAFITIFLLCLASQTLLYNLPSTTLALVLKSETDKLALLDLKERLTNGMPDSLPSWNESLHFCEWEGVTCGHRHMRVTALHLENEDWGGTLGPALANLTFLKMLKLSNINLHGQIPTQIGRLKRLQVLDLRRNNLEGEVPMELTNCTSLQVINLLYNQLTGKVPSWFGSMIHLTKLLLGANNLVGTIPPSLGNISSLENITLARNQLEGSIPYALGRLSNLKELNLGLNNLSGIVPHSLYNLSNIQVLVLAKNQLFGTLPSNMHLAFPNLQAFLVGWNQLTGTFPSSISNITGLKWFDISTNGFHGSIPPTLGSLNNLRRFNIGYNNFGSGTTHDLDFFSSLTNCTQLRILNLDNNRFGSVLPDLIGNFSTHLNLLTMARNQISGVIPEGIGQLIGLTSFVMIENFLEGTIPDSIGELKNLGRLALQDNKLSGKIPAVIGNLTMLSELYLHTNKFEGSIPFTLRYCTQLQSFGACDNNLSGDIPNQTFGYLESLIVLDLSNNSLSGPIPSEFGNLKQLSILYLSANKLSGEIPKELGACLALTELMLDRNLFRGSIPSFLGSFRSLGILNLSSNNFASTIPPELENLTLLNSLDLSFNHLYGEVPTGGVFNNVTAISLIGNKDLCGGIPQLKLPACSTSPSKKHKTSLEKNVILITVAGGVLMSLIVFISIYYLRKKAKTLSSLPFLQNRYLKVSYGELHEATNGFSSSNLVGTGSFGSVYKGSLVHFEGPIAVKVLNHETRGASKSFVAECKVLEKMKHQNLLKLLTFCLSVDYNGEVFKALVFEFMPNGSLESLLHSSEHESRNLNLNLTHRLNIALDVAQALDYLHHNSEQAVVHCDIKPSNILLDDHIVAYLGDFGLARFLHEATGHSSKDQVSSFAIKGTIGYVAPATILLPFTLHRVWSRWSSIATRRYLFSYGILLLEMLTGKRPTDSMFGEGLSLHKFCKMAIPERITEIVYWRLHSPFAGEGTGAMEENIRECLVSFARIGIACSAEFPTQRMDIKEVIAELHAIKQKIPPQEPLL. 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00849 1026 Pfam Protein kinase domain 709 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g00849 1026 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 72 339 - -
Seca7g00849 1026 Pfam Leucine rich repeat 477 529 IPR001611 GO:0005515
Seca7g00849 1026 Pfam Leucine rich repeat 197 256 IPR001611 GO:0005515
Seca7g00849 1026 PANTHER OS04G0122200 PROTEIN 106 221 - -
Seca7g00849 1026 SMART LRR_typ_2 564 587 IPR003591 -
Seca7g00849 1026 SMART LRR_typ_2 492 515 IPR003591 -
Seca7g00849 1026 SMART LRR_typ_2 346 369 IPR003591 -
Seca7g00849 1026 SMART LRR_typ_2 588 613 IPR003591 -
Seca7g00849 1026 SMART LRR_typ_2 516 540 IPR003591 -
Seca7g00849 1026 SMART LRR_typ_2 219 242 IPR003591 -
Seca7g00849 1026 SMART LRR_typ_2 419 443 IPR003591 -
Seca7g00849 1026 SMART LRR_typ_2 171 195 IPR003591 -
Seca7g00849 1026 SMART LRR_typ_2 123 147 IPR003591 -
Seca7g00849 1026 SUPERFAMILY L domain-like 33 284 - -
Seca7g00849 1026 Gene3D Ribonuclease Inhibitor 32 191 IPR032675 -
Seca7g00849 1026 ProSitePatterns Protein kinases ATP-binding region signature. 713 736 IPR017441 GO:0005524
Seca7g00849 1026 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 789 1023 - -
Seca7g00849 1026 FunFam LRR receptor-like serine/threonine-protein kinase EFR 340 643 - -
Seca7g00849 1026 Pfam Leucine rich repeat N-terminal domain 33 71 IPR013210 -
Seca7g00849 1026 SUPERFAMILY Protein kinase-like (PK-like) 682 1012 IPR011009 -
Seca7g00849 1026 ProSiteProfiles Protein kinase domain profile. 707 1016 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g00849 1026 ProSitePatterns Serine/Threonine protein kinases active-site signature. 837 849 IPR008271 GO:0004672|GO:0006468
Seca7g00849 1026 Gene3D Phosphorylase Kinase; domain 1 670 788 - -
Seca7g00849 1026 Gene3D Ribonuclease Inhibitor 194 268 IPR032675 -
Seca7g00849 1026 Gene3D Ribonuclease Inhibitor 269 336 IPR032675 -
Seca7g00849 1026 SMART serkin_6 707 1016 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g00849 1026 FunFam LRR receptor-like serine/threonine-protein kinase EFR 678 788 - -
Seca7g00849 1026 SUPERFAMILY RNI-like 269 607 - -
Seca7g00849 1026 Gene3D Transferase(Phosphotransferase) domain 1 789 1022 - -
Seca7g00849 1026 Gene3D Ribonuclease Inhibitor 337 646 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00849 Seca-Chr7 10199716 10203512 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00849 32 1018 Receptor kinase-like Gene Family AT3G47570 42.460 0.0 744
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Seca7g00849 Pkinase 1.2e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00849 - - gmx:100776429 1377.84