Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00839 ATGGCATCTATGGCCACACTCACACTACTCTTCTTTGCTATCATCTTCACCGTCCTTTTTTTTCTCCACCGGACCACCCGCTACCGCCGCCATCTCCGCCTACCGCCGGGGAACCTTGGGCTTCCCTTTATCGGCGAGACCCTGCAGTTAATATCAGCCTACAAGAGCGACAATCCAGAGCCGTTCATCGACCAGCGAGTGAACCGGTTCGGTCCAATCTTCACGACTCACGTGTTCGGCGAGCCAACCGTGTTCTCGGCCGATCCGGAAACGAACCGGTTCATTTTGCTTAACGAAGGGAAGCTGTTCGATTGCAGTTATCCCGGTTCGATATCAAACCTTCTAGGGAAACACTCTCTGCTTCTCATGAAAGGTTCACTTCACAAGAGAATGCATTCACTCACTATGAGCTTCGCTAACTCTTCCATCATCAAGGATCATCTACTTGTTGACATAGACCGCCTCATCCGGCTCAACTTGGATTCCTGGACCGACCGGGTTTTTCTCATGGAGGAAGCCAAAAAGATAACGTTTGAGTTGACAGTGAAGCAGCTAATGAGCTTTGATCCAGGTGAATGGACTGAGACTCTGAGGAAACAGTACGTTCTTGTGATTGAAGGATTTTTCACACTCCCCTTACCTCTCTTCTCTTCTACCTACCGCAAAGCCATCAAGGCAAGAACGAAGGTGGCAGAGGCATTAACGTTGATTGTGAGGCAGAGGAGGAAAGAGAGCATAACAGGGGAGAAAAAGAATGACATGTTAGGGGCACTATTGGCCTCCGGAGATCACTTTTCCGATGAGCAAATAGTGGATTTCATGTTGGCTTTGCTCGTCGCCGGCTATGAAACCACTTCTACCATAATGACCCTCGCCGTCAAGTTCCTCACCGAGACTCCTCTAGCATTGGCACAGCTCAAGGAAGAGCATGACCAAATCAGAGCAAAGAAGAGTTACTCGGATGAACCACTGGAGTGGACTGATTACAAGTCAATGGCATTTACTCAATGTGTTGTGAATGAGACTTTGAGGGTAGCAAACATAATTGGTGGAATATTTAGGAGAGCAATGACAGACATCAACATAAAAGGTTACACTATTCCTAAGGGATGGAAGGTCTTTGCATCATTTCGTGCTGTACATCTAAACTCTGATCATTTCAAAGATGCTCGCACTTTCAATCCATGGAGATGGCAGCAGAGTAACTCAGAAGCAACAAGCCCTGGGAATGTATACACACCATTTGGAGGAGGGCCACGGTTGTGCCCTGGCTATGAGCTTGCCAGAGTTGTGCTCTCTGTCTTCCTCCACCGCATTGTCACCCGTTACAGTTGGTTTCCTGCAGAAGAAGATAAGTTGGTGTTTTTCCCAACAACTAGGACGCAGAAGAGGTATCCTATCATAGTGAAGCGTAGGGAGGAGTCTAGATCATGTAAAGCACCATGA 1446 0.4779 MASMATLTLLFFAIIFTVLFFLHRTTRYRRHLRLPPGNLGLPFIGETLQLISAYKSDNPEPFIDQRVNRFGPIFTTHVFGEPTVFSADPETNRFILLNEGKLFDCSYPGSISNLLGKHSLLLMKGSLHKRMHSLTMSFANSSIIKDHLLVDIDRLIRLNLDSWTDRVFLMEEAKKITFELTVKQLMSFDPGEWTETLRKQYVLVIEGFFTLPLPLFSSTYRKAIKARTKVAEALTLIVRQRRKESITGEKKNDMLGALLASGDHFSDEQIVDFMLALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDQIRAKKSYSDEPLEWTDYKSMAFTQCVVNETLRVANIIGGIFRRAMTDINIKGYTIPKGWKVFASFRAVHLNSDHFKDARTFNPWRWQQSNSEATSPGNVYTPFGGGPRLCPGYELARVVLSVFLHRIVTRYSWFPAEEDKLVFFPTTRTQKRYPIIVKRREESRSCKAP. 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00839 481 FunFam Cytochrome P450 90A1 23 472 - -
Seca7g00839 481 SUPERFAMILY Cytochrome P450 27 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g00839 481 CDD CYP90-like 66 471 - -
Seca7g00839 481 PANTHER CYTOCHROME P450 26 30 446 - -
Seca7g00839 481 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g00839 481 PRINTS E-class P450 group I signature 376 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g00839 481 PRINTS E-class P450 group I signature 289 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g00839 481 PRINTS E-class P450 group I signature 422 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g00839 481 PRINTS E-class P450 group I signature 412 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g00839 481 PRINTS E-class P450 group I signature 336 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g00839 481 PRINTS E-class P450 group I signature 269 286 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g00839 481 PRINTS P450 superfamily signature 422 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g00839 481 PRINTS P450 superfamily signature 337 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g00839 481 PRINTS P450 superfamily signature 413 422 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g00839 481 PRINTS P450 superfamily signature 280 297 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g00839 481 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 415 424 IPR017972 GO:0005506|GO:0016705
Seca7g00839 481 Gene3D Cytochrome P450 24 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca7g00839 481 Pfam Cytochrome P450 209 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00839 Seca-Chr7 10057862 10063341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00839 123 473 Cytochrome P450 AT5G05690 81.250 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00839 K09588 - gmx:100781291 849.351