Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00834 ATGATGGAGAACAAACCAGTGTCACCCTCTTCCGTCGCCACAACAACCTTCATTCTCTCCGTCGTCTTTATCCTCTTCTCTTTATTACCATTATGCCACTCTCTCGGCTCCGGCACCACCCTCGCCGTCGTCGACGCCACCGCCACTGTCTGCGGCGTGGTGGCAGAGCAACCAACGCGGCGCATTGAGTGCTACCGCCGCGGCCACGTCATCGCCGCCGCGCCTAACATCTCGTTCTCGGTGATCTCCGGCGGAAGGAGCTACTTCTGCGGCCTGAGGTCCGGCAACTACACTCTCCTCTGTTGGGATACCCTCTCGTCCTTCAAAAGCAAGAGACTTTACAACAATGGCACTGTTTTATTCGAGAATCTCTCCGTTGGTGATGCACAGGTTTGCGCCACCGTCGTCGGCGCCGGAACGGTGTCGTGTTGGAGAGTCGATAAAGCGTTTGAATTGCCTTCTGGGTCGGAGCAGTTTTCGTCTATCACATCTGGGTCAGGTTTCTCTTGTGGTATTATGAGGAATGGTTCTTGGGTTCGGTGTTGGGGGAATGAGTCTATTGCTAGGAAGATGGAGAATGCGTTTGGAAACATGTCTATGGTGAGTCTTGTGGCTGGTGAGTCACATGTTTGTGGATTGAATACAACTGGGTTTTTGGTTTGTAAAGGAAGTAACAGTTTTGGTCAAATAGATGTTCCTCAAGGTGAGCCTTTGGAGTTTTCTGGTTTGGCATTAGGTGCTGAACATAGCTGTGCTATTAGGAGATCCAATGGTTCTGTTGTTTGTTGGGGTGGTAGAGGATTGTTCTCTGCTAATGTTACACAAGGTGTTTCTTTTGAGATCATTGTTTCTGGGTCTAATTTCACTTGTGGATTGACAACAAACAATTTTTCAGTTATTTGTTGGGGTCCTGGTTGGTCTAATGGTTCTGATTCTGGTTCAAGTTTTGAGCTTCCCTTGTCTCCTATTCTTCCAGGGCCTTGTGTTCAATCTTCTTGTAGTGAATGTGGTATATATCCTCAATCTCAATCTCTGTGTTCTGGCACTGGTAACATTTGCAAGCCACAACCTTGTTTGCCTCAAATGCCAGTGCCTACACCACCGCGGATACCGCCATTGGTGCCACCGGCGGCGCCACCTTCCCGGTCAAAGACATTGACAAGGGGCTTATTGGCATTTGCCATTGTTGGATCAGTTGGTGCTGTTGCTGGTATTTGCACAGTTTTGTATTGCTTGTGGACTGGTGTGTGTTTTGGGAATAAGAAAATTCACAATTCTGTGCAACCAACAATTACTAGAGGTGGAAGTTTCAATGGTGGTGCTATTTCAAATAATAGTCCACTTTCAAGATCATCCACCATTAGGCGTCAAGGGTCAAGGATAATGAGGCGCCAGAGGAGTGGAACTTCATCAACAAAACACCCAGATAGGGCAGAGGAATTAACCTTGGTTGAGCTTATTGCAGCCACCAACAATTTCTCACTTGAGAACAAGATTGGTGCTGGGAGCTATGGCATTGTGTATAAAGGCAAACTTGCTGATGGCCGTGAGGTGGCTATCAAAAGGGGTGAAACTGGTACTAAGATGAAGATGTTTCAAGAGAAAGAAAGTGCATTTGAGTCAGAATTGGCCTTCTTGTCCCGTTTACACCACAAGCACTTGGTTAGGCTAGTTGGATTCTGTGAAGAGAAAGATGAGAGGCTCTTGGTGTATGAATACATGAAGAATGGGGCATTATATGATCATTTGCATGACAAAAACAATGTGGACAAGAATAGTAGTGTGTTGAATTCTTGGAGATTGAGGATCAAAATTGCGCTGGATGCTTCGCGAGGAATTGAATATCTACATAACTATGCAGTTCCATCTATAATTCACAGAGATATCAAGTCTTCAAATATTCTTATTGACGCGAATTGGATGGCAAGAGTGTCTGATTTTGGATTGTCATTGATGAGTCCAGATTCTGATCATGATTACAGGCCAATTAAGGCAGCAGGAACAGTTGGATACATTGATCCTGAATATTATGGTCTAAATGTGTTGACAGCAAAGAGTGATGTCTATGGGCTTGGAGTGGTACTACTAGAACTTATAACAGGAAAAAGAGCTATATTCAAGAATGGTGAAAATGGAGGCACCCCAGTGAGTGTGGTAGATTTTGCAGTGCCTGTAATTATGGCAGGAGAATTGGCAAAAATTTTGGATCCAAGGGTTGAACCACCAGAGTTGAATGAAACAGAAGCAGTGGAGCTTGTGGCTTATACTGCTATGCATTGTGTAAATTTGGAGGGGAAAGATAGACCAACAATAGCTGACATTGTGGCCAATTTGGAGCGTGCTTTGGCTCTTTGTGATAGTAGTCATGGCAGCATTTCTAGTGCTACAATCTCTCTTGGATCTGACTGA 2409 0.4521 MMENKPVSPSSVATTTFILSVVFILFSLLPLCHSLGSGTTLAVVDATATVCGVVAEQPTRRIECYRRGHVIAAAPNISFSVISGGRSYFCGLRSGNYTLLCWDTLSSFKSKRLYNNGTVLFENLSVGDAQVCATVVGAGTVSCWRVDKAFELPSGSEQFSSITSGSGFSCGIMRNGSWVRCWGNESIARKMENAFGNMSMVSLVAGESHVCGLNTTGFLVCKGSNSFGQIDVPQGEPLEFSGLALGAEHSCAIRRSNGSVVCWGGRGLFSANVTQGVSFEIIVSGSNFTCGLTTNNFSVICWGPGWSNGSDSGSSFELPLSPILPGPCVQSSCSECGIYPQSQSLCSGTGNICKPQPCLPQMPVPTPPRIPPLVPPAAPPSRSKTLTRGLLAFAIVGSVGAVAGICTVLYCLWTGVCFGNKKIHNSVQPTITRGGSFNGGAISNNSPLSRSSTIRRQGSRIMRRQRSGTSSTKHPDRAEELTLVELIAATNNFSLENKIGAGSYGIVYKGKLADGREVAIKRGETGTKMKMFQEKESAFESELAFLSRLHHKHLVRLVGFCEEKDERLLVYEYMKNGALYDHLHDKNNVDKNSSVLNSWRLRIKIALDASRGIEYLHNYAVPSIIHRDIKSSNILIDANWMARVSDFGLSLMSPDSDHDYRPIKAAGTVGYIDPEYYGLNVLTAKSDVYGLGVVLLELITGKRAIFKNGENGGTPVSVVDFAVPVIMAGELAKILDPRVEPPELNETEAVELVAYTAMHCVNLEGKDRPTIADIVANLERALALCDSSHGSISSATISLGSD. 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00834 802 Gene3D - 33 193 IPR009091 -
Seca7g00834 802 Gene3D - 194 337 IPR009091 -
Seca7g00834 802 ProSitePatterns Protein kinases ATP-binding region signature. 499 521 IPR017441 GO:0005524
Seca7g00834 802 SUPERFAMILY RCC1/BLIP-II 74 305 IPR009091 -
Seca7g00834 802 ProSiteProfiles Protein kinase domain profile. 493 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g00834 802 MobiDBLite consensus disorder prediction 434 475 - -
Seca7g00834 802 Gene3D Transferase(Phosphotransferase) domain 1 574 791 - -
Seca7g00834 802 Pfam Protein kinase domain 494 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g00834 802 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 197 788 IPR044815 GO:0004674
Seca7g00834 802 SMART serkin_6 493 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g00834 802 Gene3D Phosphorylase Kinase; domain 1 454 573 - -
Seca7g00834 802 FunFam Serine/threonine-protein kinase-like protein CCR4 574 796 - -
Seca7g00834 802 MobiDBLite consensus disorder prediction 434 456 - -
Seca7g00834 802 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672|GO:0006468
Seca7g00834 802 CDD STKc_IRAK 499 780 - -
Seca7g00834 802 FunFam serine/threonine-protein kinase-like protein CCR1 462 573 - -
Seca7g00834 802 SUPERFAMILY Protein kinase-like (PK-like) 472 778 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00834 Seca-Chr7 9980176 9982584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00834 10 802 Receptor kinase-like Gene Family AT3G55950 59.805 0.0 874
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Seca7g00834 Pkinase 5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00834 - - gmx:100798905 1301.96