Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00832 ATGGCCATGGCTGTATCCAACGGCGTCGAAGCTGTGTTTGAGTTTCTGAGGAAGAATGGATTATCGGAAGCAGAGTCTGCTCTCAGAGAAGACATCATCGAGAAGAGTGATGATCTCGCTTCCTTTGACTACGAGAAGTTCTTCTTTCCGATGGTTCCGCCGCCGCCTCCGGTAAGAGTCCGGTCGTTTTCCCGGCCGTCGGAGCTTCCTGTTACCGGAGAATGTTCCAAATCGAGCTCTACTTCGTCGGAGGATCAGTTTGTTAGCATCGGTTCACCTGCTTCTCGTGTTTCTTCTTTAGAATTCATCAATCCATATGGAATCCGTTCCTCATCTCAGACTCAGAATGATTCTGACTCTTCGTCTGATAGATTATCCCAATTTGGCACAGCGCGTGATTATCATGACTTTGATATGCAAAATGAACCATATTGGTATAATGAAAAGGATGATGACTATTTCATGACTCCTAGTTTTGAAGGGCCGGATTTCTTTGGGTGTCAAAGTGAAGATAAGTTTGTCATGACAGCAGAAATGGAAAATCAACAACACAATTCTCTGGATCTTGATTACAACTATGAACAACTTCAATTAGAGGGAAATGATGGTTACATGGACAAGGCATGCCTTTTTAATCCTTCCTCTGTAGGGGATGAAAAAGTGACTTATTCAAAAGGCTGTTGTCATGTGGATAGCAAAGATCAGTTTGATGTGGAATTAGAGGGCAAGGCTGAGAAACACACTGACACTGTTGCCTATAGTTGTGACAAAAGCTGTCCAGGTTCAGGAGGTGATTCTTGTAGTGGGGACCCTAATTTGAAGGAAATCCATCTGAATGACTTTGATTTGAAGGTTGTTAGGGATATTAACTCTTTTGATTCTGCTCTGGAGCATACTGGGAATCAAAGTTTTGACTACTACACTAAAAATGACAGCAGTGAGGGGTTCAAGGGTCCCTATGACTTAACTATCGAAGTTGATGAAATAGATCTACCAAATGGACTCGACACCTATGAACCACCGGATGGTAGAGGACTCGACCCAGAATGCCAAGATCCAGAGATTGCAGCAGATGTAGAGGAGGCTACTGATGATGAGCTCTTAAAATACATTCAAGAGGATGAATATGAAGTATTTGACCTTAGAATTATACATAGAAAGAACAGGACTGGATTTGAAGAAAGCAAGGAACTGCCCATTGTGCTAAATACAGTCTTGGCTGGCAGGTACTATGTAACAGAATATCTTGGTTCAGCTGCCTTTAGTAGGGTTGTTCAGGCACATGATCTTCAGAAAGGAGTAGACGTTTGCTTGAAGATTATTAAAAATGACAAAGACTTCTTTGATCAAAGCTTAGATGAAATCAAGCTCCTGAAACTTGTCAATAAGCATGACCCAGCAGATAAACACCACATCTTGCGTCTTTATGACTATTTCTATCATCAGGAGCATTTATTCATTGTGACTGAACTTCTGCGAGCAAACTTATATGAGTTTCAGAAATTCAATCAAGAATCTGGAGGGGAAGCATATTTTACATTGAACAGATTGCAGCTCATTACGCGTCAGTGTTTGGAGGCACTGCAATACTTGCATAACTTGGGAATTGTTCATTGCGACCTGAAGCCAGAAAACATTCTAATCAAAAGTTACAAAAGGTGTGAGATAAAGGTTATTGATCTTGGAAGCAGTTGTTTTCTAACAGACAATCTTTGTCTATATGTACAATCCCGATCCTATAGAGCCCCTGAAGTGATGTTAGGCCTTCAATATGACGAAAAGATTGATATATGGTCTCTCGGCTGTATTTTGGCAGAGCTCTGCTCTGGTGAAGTGCTCTTTCCAAATGATGCAGTTGTGATGATTCTCGCACGCATGATTGGAATGTTTGGTCCTATTGATCTGGAGATGTTGGTGAAAGGACAGGAAACACACAAGTATTTCACCAAAGAATATGATATTTATTATGTTAATGAGGTTCGTTTCCCGTTTTTTTTTCCTTTATAG 2007 0.4096 MAMAVSNGVEAVFEFLRKNGLSEAESALREDIIEKSDDLASFDYEKFFFPMVPPPPPVRVRSFSRPSELPVTGECSKSSSTSSEDQFVSIGSPASRVSSLEFINPYGIRSSSQTQNDSDSSSDRLSQFGTARDYHDFDMQNEPYWYNEKDDDYFMTPSFEGPDFFGCQSEDKFVMTAEMENQQHNSLDLDYNYEQLQLEGNDGYMDKACLFNPSSVGDEKVTYSKGCCHVDSKDQFDVELEGKAEKHTDTVAYSCDKSCPGSGGDSCSGDPNLKEIHLNDFDLKVVRDINSFDSALEHTGNQSFDYYTKNDSSEGFKGPYDLTIEVDEIDLPNGLDTYEPPDGRGLDPECQDPEIAADVEEATDDELLKYIQEDEYEVFDLRIIHRKNRTGFEESKELPIVLNTVLAGRYYVTEYLGSAAFSRVVQAHDLQKGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKHDPADKHHILRLYDYFYHQEHLFIVTELLRANLYEFQKFNQESGGEAYFTLNRLQLITRQCLEALQYLHNLGIVHCDLKPENILIKSYKRCEIKVIDLGSSCFLTDNLCLYVQSRSYRAPEVMLGLQYDEKIDIWSLGCILAELCSGEVLFPNDAVVMILARMIGMFGPIDLEMLVKGQETHKYFTKEYDIYYVNEVRFPFFFPL. 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00832 668 SUPERFAMILY Protein kinase-like (PK-like) 399 659 IPR011009 -
Seca7g00832 668 FunFam Putative serine/threonine-protein kinase dyrk2 404 491 - -
Seca7g00832 668 Gene3D Transferase(Phosphotransferase) domain 1 464 660 - -
Seca7g00832 668 Gene3D Phosphorylase Kinase; domain 1 405 491 - -
Seca7g00832 668 ProSiteProfiles Protein kinase domain profile. 410 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g00832 668 SMART serkin_6 410 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g00832 668 PANTHER DUAL SPECIFICITY PROTEIN KINASE 113 649 - -
Seca7g00832 668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 536 548 IPR008271 GO:0004672|GO:0006468
Seca7g00832 668 Pfam Protein kinase domain 412 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g00832 668 MobiDBLite consensus disorder prediction 71 90 - -
Seca7g00832 668 CDD PKc_DYRK_like 410 650 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00832 Seca-Chr7 9927796 9932476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00832 407 649 MAP Kinase Gene Family AT5G19010 33.080 4.12e-30 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Seca7g00832 Pkinase 3.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00832 - - gmx:100783988 1036.94