Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00808 ATGAAGGGTTATGAACCCCGGTCAAGCTCTTCTTGTGCAGCCTGCAAGTTCTTGAAAAGAAGATGCATACCCAATTGTATATTTGCACCTTACTTTCGCTCTGATGAGTGCAAGAAATTTGCCAAGGTTCACAAGGTGTTTGGAGCCAGCAATGTGAGCAAGATCCTCATTGAAGTGCCAGAGGAGCAGAGGGAGGACACTGTGAATTCACTGGCTTATGAGGCTGAGGCAAGGCTTAGAGACCCAGTTTATGGATGCATAGGTGCCATAGCACTGTTGCAAAGGAAGATGGTGGAGCTTCAACATGACCTTGCCATTGCTAAGGATCGTCTTGCTCGTTATGCTGCTGCTGCTACCACCCCTTCAAGTTCAACTGATATCTCGAGTTCCAATGTTAGCTTGCCACCCTTCCCTGATTTCTTCACCTGCAGTGATTTCAATGACAGCTTCTGCCACAGCTCTTCATCTCAGTCATTGAGCAGACATGAAACGTATCTTTTCTCTGAAAATTCTGATGATCTCCCAATTCCCACCACTGTTGTTTGGTTAGTAAAGACACAATCATCAGGCCAAAGAAAAGGTCCCCCCCCCCCAAATGAATTGAGATCACCAATCTGTGATGTAGACAATAAACCAGATCATCCTGAGCATTCATTGCCATTATCCACATATCATGGAGCACCCATTGTGACTTTCAGAGTCACAAACCCCACCAATGGTCCTTACACTTTACCGTGTCATGGGTATCCAAAGACCATAAAGGTGAATCAGTTTCTTTGCCGTCTATAG 789 0.4537 MKGYEPRSSSSCAACKFLKRRCIPNCIFAPYFRSDECKKFAKVHKVFGASNVSKILIEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMVELQHDLAIAKDRLARYAAAATTPSSSTDISSSNVSLPPFPDFFTCSDFNDSFCHSSSSQSLSRHETYLFSENSDDLPIPTTVVWLVKTQSSGQRKGPPPPNELRSPICDVDNKPDHPEHSLPLSTYHGAPIVTFRVTNPTNGPYTLPCHGYPKTIKVNQFLCRL. 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00808 262 MobiDBLite consensus disorder prediction 187 220 - -
Seca7g00808 262 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Seca7g00808 262 Pfam Lateral organ boundaries (LOB) domain 11 108 IPR004883 -
Seca7g00808 262 Coils Coil 90 117 - -
Seca7g00808 262 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 9 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00808 Seca-Chr7 9498974 9500337 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00808 1 141 AS2 family AT3G11090 65.972 1.34e-63 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Seca7g00808 LOB 1.6e-37 No_clan