Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00773 ATGGACACTACTAGGGAGAAGAAAAAGAAGAAGAAGACTCACCAAATTTCTCAACTTGGGATGAGAAATGCAGCAGATTGGCACCATTTCCATCACAACCCACGTCATTTTTTCCGGTTGTTTTTCTGGGTCTACTGTTTCTGCCTTCTTCTGCTCTCCCTTAAGCCTGTTTTAGGTGAAGAGCGTTGGGATGGAGTGGTTGTGACACAGTCAAACTTCTTAGCACTTCAAGCATTCAAGCAAGAGTTGATTGATCCCAAAGGCTTCCTTCGAAGCTGGAATGATAGTGGCTATGGAGCTTGTTCTGGAGGTTGGGTTGGTATCAAGTGTGCTCAGGGACAGGTTATTGTAATTCAACTTCCATGGAAAGGGTTGCAAGGGCGTATCACTGAGAGGATTGGTCAACTTCAAGGGCTTAGAAAGCTTAGTCTTCATGATAACCAAATTGGTGGTTCAATCCCTTCAGCATTGGGACTTCTTCTCAATCTAAGAGGGGTTCAACTGTTCAATAATAGGTTTACAGGGTCTATCCCTCTTTCATTAGGTTCATGTCCTTTGCTTCAGTCTTTAGACCTTAGTAACAATTTGCTCACAGGGACAATCCCTGATAGCCTTGGGAATTCCACTAAGCTTTATTGGCTTAACTTGAGCTTCAATTCCTTCTCTGGTCCAATACCATCTAGCCTAACTAGCTTACCTTCTCTCACCTTCTTATCTCTTCAACATAACAATCTCTCAGGATCTATTCCTAACTCATGGGGTGGCAGCTTGAAGAACAGCTTCTTTAGGCTTCAAAATCTTATCTTAGATCATAACTTCTTGAGTGGAAACCTTCCTGCTTCTTTGGGCAACTTAAGAGAGCTCAAAGAGATTTCTCTTAGTCATAACCAGTTTAGTGGAGCTATACCAAATGAAATAGGAAGCCTTTCTAGGCTTAAGACAGTGGATTTTTCTAATAATGCCTTGAACGGAACCTTGCCTACTACTCTCTCTAATTTATCCTCACTCACTATGTTGAATGTAGAGAACAACCACCTTGGCAATCAAATCCCAGAAGCTTTAGGCAGATTACATAATCTTTCTGTTTTAATTTTGGGCAGAAACCAATTTAGTGGCCACATTCCTCAAAGTATTGGAAACATTTCAATGCTTACACAGCTTGATTTGTCACTGAATAATCTCAGTGGAGAAATTCCAGACTCCTTTGGCAATCTAAGTAGTCTTAATTTCTTCAATGTTTCTTATAATAACCTCTCTGGTCCAGTTCCAACTCTACTTGCTCAGAAATTTAACTCAAGCTCATTTGTGGGAAATATTCAACTATGTGGGTACAGCCCTTCAACCCCATGTCCCCCACCAGCTCCACCAGCTCCTTCTGAAGGACAAAGAGTCCCTGCTGCACCTTCTGAAGTACAAAAACACCACCATCACAAGAAACTAGGTACCAAAGACATAATTCTCATAGTAGCAGGTGTGCTCCTTGTGGTCCTGATAACAATCTGCTGCATCTTGCTCTTCTGCCTAATGAGAAAAAGAGCAACATCAAATGCAGAGGGTGGCCAGGCCACAGGGAGAGCTGCTGCTACCAGGACAGAGAAAGGAGTCCCTCCTGTTGCTGGTGAAGCTGAAACAGGTGGTGGTGAGAATGGAGGTAAACTAGTCCATTTTGATGGACCATTGGCTTTTACAGCTGATGATCTCTTGTGTGCAACAGCAGAAATAATGGGAAAGAGTACTTATGGAACTGTGTATAAGGCTACATTAGAGGATGGAAGTCAAGCTGCAGTGAAACGATTGAGGGAAAAGATCACAAAAAGTCAGAGAGAATTTGAATCTGAAGTTAGTATTCTAGGGAGAATTAGACACCCAAATCTTTTGGCACTAAGAGCCTACTACTTGGGACCCAAAGGAGAAAAGCTTCTGGTTTTTGATTACATGCCTAAAGGAAGTCTTGCTTCTTTCCTGCATGCTCGTGAACCTGAAACAACCATTGATTGGCCAACAAGGATGAATATAGCACAGGGAATGGCTCGTGGCTTGTTTTACCTTCATTCACATGAGAATATTATACATGGGAACCTTACATCAAGCAATGTCTTGCTTGATGAGAATACAAATGCTAAAATAGCTGATTTTGGTCTTTCTCGGTTGATGACAACTGCTGCTAATTCTAATGTGATTGCTACTGCTGGAGCATTGGGATACAGAGCACCTGAGCTATCAAAGCTTAAGAAAGCCAACACAAAAACTGATGTATACAGTCTTGGTGTCATCTTGTTAGAACTCCTAACGGGGAAGCCACCTGGTGAGGCTATGAATGGCGTAGATTTACCTCAGTGGGTTGCCTCTATTGTCAAAGAGGAGTGGACAAATGAGGTTTTCGATGTTGAGTTGATGAGAGATGCATCAACAAATGGTGATGAGTTGCTAAACACTTTGAAGCTTGCTTTGCATTGTGTTGATCCTTCTCCATCAGCACGACCAGAAGCTCAGCAAGTTCTCCAGCAACTAGAAGAGATTAGACCACAGACATTATCCATTTCTGGTGATGAAGGAGCCATCCCTTCCACCAGTGAATAA 2580 0.4229 MDTTREKKKKKKTHQISQLGMRNAADWHHFHHNPRHFFRLFFWVYCFCLLLLSLKPVLGEERWDGVVVTQSNFLALQAFKQELIDPKGFLRSWNDSGYGACSGGWVGIKCAQGQVIVIQLPWKGLQGRITERIGQLQGLRKLSLHDNQIGGSIPSALGLLLNLRGVQLFNNRFTGSIPLSLGSCPLLQSLDLSNNLLTGTIPDSLGNSTKLYWLNLSFNSFSGPIPSSLTSLPSLTFLSLQHNNLSGSIPNSWGGSLKNSFFRLQNLILDHNFLSGNLPASLGNLRELKEISLSHNQFSGAIPNEIGSLSRLKTVDFSNNALNGTLPTTLSNLSSLTMLNVENNHLGNQIPEALGRLHNLSVLILGRNQFSGHIPQSIGNISMLTQLDLSLNNLSGEIPDSFGNLSSLNFFNVSYNNLSGPVPTLLAQKFNSSSFVGNIQLCGYSPSTPCPPPAPPAPSEGQRVPAAPSEVQKHHHHKKLGTKDIILIVAGVLLVVLITICCILLFCLMRKRATSNAEGGQATGRAAATRTEKGVPPVAGEAETGGGENGGKLVHFDGPLAFTADDLLCATAEIMGKSTYGTVYKATLEDGSQAAVKRLREKITKSQREFESEVSILGRIRHPNLLALRAYYLGPKGEKLLVFDYMPKGSLASFLHAREPETTIDWPTRMNIAQGMARGLFYLHSHENIIHGNLTSSNVLLDENTNAKIADFGLSRLMTTAANSNVIATAGALGYRAPELSKLKKANTKTDVYSLGVILLELLTGKPPGEAMNGVDLPQWVASIVKEEWTNEVFDVELMRDASTNGDELLNTLKLALHCVDPSPSARPEAQQVLQQLEEIRPQTLSISGDEGAIPSTSE. 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00773 859 SMART LRR_typ_2 285 309 IPR003591 -
Seca7g00773 859 SMART LRR_typ_2 333 357 IPR003591 -
Seca7g00773 859 SMART LRR_typ_2 381 404 IPR003591 -
Seca7g00773 859 SMART LRR_typ_2 136 160 IPR003591 -
Seca7g00773 859 SMART LRR_typ_2 232 255 IPR003591 -
Seca7g00773 859 SMART LRR_typ_2 184 208 IPR003591 -
Seca7g00773 859 Gene3D Transferase(Phosphotransferase) domain 1 647 850 - -
Seca7g00773 859 Gene3D Phosphorylase Kinase; domain 1 575 646 - -
Seca7g00773 859 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 259 453 - -
Seca7g00773 859 Gene3D Ribonuclease Inhibitor 326 451 IPR032675 -
Seca7g00773 859 Gene3D Ribonuclease Inhibitor 70 225 IPR032675 -
Seca7g00773 859 Pfam Protein tyrosine and serine/threonine kinase 572 837 IPR001245 GO:0004672|GO:0006468
Seca7g00773 859 Pfam Leucine rich repeat N-terminal domain 74 110 IPR013210 -
Seca7g00773 859 MobiDBLite consensus disorder prediction 450 476 - -
Seca7g00773 859 Gene3D Ribonuclease Inhibitor 226 325 IPR032675 -
Seca7g00773 859 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 263 840 - -
Seca7g00773 859 FunFam Leucine-rich repeat receptor protein kinase EMS1 182 258 - -
Seca7g00773 859 SUPERFAMILY L domain-like 109 444 - -
Seca7g00773 859 FunFam Leucine-rich repeat receptor-like kinase 71 181 - -
Seca7g00773 859 Pfam Leucine rich repeat 186 245 IPR001611 GO:0005515
Seca7g00773 859 SUPERFAMILY Protein kinase-like (PK-like) 573 841 IPR011009 -
Seca7g00773 859 FunFam Leucine-rich repeat receptor-like protein kinase 554 645 - -
Seca7g00773 859 CDD STKc_IRAK 575 840 - -
Seca7g00773 859 ProSiteProfiles Protein kinase domain profile. 569 840 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g00773 859 MobiDBLite consensus disorder prediction 518 549 - -
Seca7g00773 859 FunFam Pollen receptor-like kinase 1 646 849 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00773 Seca-Chr7 9135247 9138632 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00773 63 842 Receptor kinase-like Gene Family AT3G51740 65.006 0.0 964
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Seca7g00773 PK_Tyr_Ser-Thr 3.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00773 - - gmx:100811174 1318.52