Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00754 ATGGACAACATTCATGACTCAACACCCAAATCAAAACTTGCCCCTATGACCAACACCACCGCCCCTCTCCTCCCACCGGACTCCGAGCACTCCCCGGAAGATCCGATTCCGCAAAATGGGTCCATTTCCGGAGCGGTGTTCAACGTATCAACCACCATGATCGGTGCCGGAATCATGTCGGTTCCGGCAACAATGAAGGTGCTGGGCATAATTCCGGGGTTCGTGGTTATCGTATTGGTAGCACTGATAACAGATGTCACGGTAGAGTTTATGTTGAGGTACACGAGTTCCGGAAAATCCACTACCTATGCGGGTATGGTGGGTGAGTCATTTGGGTCCCTAGGTTCCCTTGCTGTCAAGATTTGCGTCATCACAACCAATTTGGGTGTCCTCATCATCTATTTCATTATTCTTGGAGACATACTATGTGGAAATGAGTCCAAAGGAACCACACATTTGGGCATTCTACAAGAATGGTTTGGTATCCACTGGTGGACCTCTCGCGCTTTTGCTCTTCTCATAGTTGCGCTCGTCATAATGCTTCCACTTGTTATGTTACGGCGTGTTGATTCACTCAGGTATAGTTCTGCAATATCAATCCTCCTAGCATTGGTCTTTGTTGCAATATGCTCATCAATGGCGCTTAATGCACTATTGTCTGGTAAAACTCAGTCACTGAGGATCCTGCCTGATTTCTCTCAAGTCACTGCCCTTGACCTTTTCACCACTGTCCCAGTCTTTGTGACAGGTTTCGGATTTCATGTCAATGTTCATCCAATTAGAGCAGAGCTTGGAAGACCTAGAGACATGAATTTGGCTGTGCGGATTGCATTGTTAATCTGTGTGGCTATTTACTTTGCTATTGGCTTCTTTGGGTACCTATTATTTGGGGACTCCATCATGCCTGATGTATTGGTAAACTTTGATCAAAACTCCAATTCCGATGCTGGTCGATTGCTCAATGACATTGTGAGACTAAGCTATGCACTCCATCTTGCACTTGTGTTCCCCATCATGAACTATTCCTTGAGGGCTAACATAGATGAACTATTATTCTCAGAGAAAAATAAGCCTGCCCTTGCATTAGACACCCCAAGATTTGTTTCACTTACTCTTGCTTTGCTAGCCCTCACATACTTAGTTGCTGTGGCCATCCCAAATATTTGGTATTTTTTTCAATTCTTGGGATCCACAACCATTGTTTGCCTCTCATTCATATTCCCTGCTGCAATTTGTCTAAGGGATATGCATGGTATATCAACGACCAAAGATCAAGTCATGGCAATTGTGGTGATTGTTTTGGCTGTGGGGACAAGTGGAATTGCTATATGGACCAATTTGTATGGTTCAAGTGCATAA 1359 0.4452 MDNIHDSTPKSKLAPMTNTTAPLLPPDSEHSPEDPIPQNGSISGAVFNVSTTMIGAGIMSVPATMKVLGIIPGFVVIVLVALITDVTVEFMLRYTSSGKSTTYAGMVGESFGSLGSLAVKICVITTNLGVLIIYFIILGDILCGNESKGTTHLGILQEWFGIHWWTSRAFALLIVALVIMLPLVMLRRVDSLRYSSAISILLALVFVAICSSMALNALLSGKTQSLRILPDFSQVTALDLFTTVPVFVTGFGFHVNVHPIRAELGRPRDMNLAVRIALLICVAIYFAIGFFGYLLFGDSIMPDVLVNFDQNSNSDAGRLLNDIVRLSYALHLALVFPIMNYSLRANIDELLFSEKNKPALALDTPRFVSLTLALLALTYLVAVAIPNIWYFFQFLGSTTIVCLSFIFPAAICLRDMHGISTTKDQVMAIVVIVLAVGTSGIAIWTNLYGSSA. 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00754 452 PANTHER AMINO ACID TRANSPORTER 33 436 - -
Seca7g00754 452 MobiDBLite consensus disorder prediction 1 37 - -
Seca7g00754 452 Pfam Transmembrane amino acid transporter protein 39 426 IPR013057 -
Seca7g00754 452 MobiDBLite consensus disorder prediction 10 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00754 Seca-Chr7 8951506 8955515 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00754 23 452 Amino Acid or Auxin Permease AAAP Family AT3G56200 54.524 1.71e-161 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00754 - - gmx:100794031 716.072