Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00750 ATGGTTTCAAAAGAGCAAAAGAGAGCAGCACTGCATGAGAAGCTGCAACTCCTTCGTTCTATTACAAACTCTCATGCTCTAAACAAAACCTCAATCATAATCGATGCATCAAGGTATATTGAAAAGCTTAAGCAAAAAGTTGAAAGACTGAATCAAGAGATAGCCTCTGCAGAAACTTCAAGTGTCCACAATCCCTTGCCTATGGTTACCGTAGAAACCCTAGAAAAGGGATTTCTTATAAATGTTTTTTCAGCCAAATGCTGTCCAGGTCTTCTTGTTTCCATATTAGAGGTCTTTGAAGAGATGAGACTCACGGTGCTGGAAGCTAGGGTTTCTTGTACAGACACTTTTCGATTTCAAGCAGTTGGAGGAGAAAATGAAGAAGAAGGTGAGACTAGTCATGATGCACAAGCTGTGGAACAAGCGGTGGGACAAGCAATAAAGAATTGGAGCGAAAATGCAGATATTGATGAAGAGTAG 480 0.4042 MVSKEQKRAALHEKLQLLRSITNSHALNKTSIIIDASRYIEKLKQKVERLNQEIASAETSSVHNPLPMVTVETLEKGFLINVFSAKCCPGLLVSILEVFEEMRLTVLEARVSCTDTFRFQAVGGENEEEGETSHDAQAVEQAVGQAIKNWSENADIDEE. 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00750 159 Coils Coil 33 60 - -
Seca7g00750 159 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 4 153 - -
Seca7g00750 159 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 7 66 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00750 Seca-Chr7 8914510 8917009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00750 11 121 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 30.159 1.29e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00750 - - tpra:123919440 258.07