Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00710 ATGGAGCGCATGAGCATCTTATGGCTAGTGATCATAACCCAAATTCTAGTGCTAGTTTCAGAGGGTAGAAATGTCCCAGCGGTTATTGTTTTTGGAGACTCCACTGTGGATTCAGGGAACAACAATGTTATAGCTACGGTTCTGAAGAGTAACTTTAGGCCTTATGGCCGTGACTTTGACGGTGGCCAACCCACCGGACGGTTTTCCAATGGCCGTGTTCCACCAGATTTCATTGCTGAGGCTTTTGGAGTGAAAAGCTCTATACCTGCTTACTTGGATCCTGCTTATACCATTCAAGATTTTGCCACTGGAGTTTGCTTTGCCTCTGCTGGAACTGGCTATGATAATGCAACTTCTGCCGTCCTAAATGTGATACCACTATGGAAGGAAGTAGAGTACTATAAGGAGTATCAAGCCAAATTGAGAGACCATCTTGGTGTAGAGAAGGCAAATGAAATCATAGGCGAGGCATTGTATTTGATAAGTTTAGGAACCAATGATTTCCTTGAAAACTATTATGTGTTCCCTACCCGAAGACTTCACTTCACCGTTACACAATATGAAGATTTTCTAGTGGGTATTGCTGAGAATTTTGTTAAGGAATTGTACTCACTTGGAGCCCGGAAATTATCCATAACTGGTCTTGTTCCTATTGGGTGCCTCCCCTTAGAAAGGGCAACAAACATTGTAGGTTACCATGGATGCAATGAAGAATACAACAATGTGGCTTTGGAATTCAATAAGAAGTTGGAGAATATGATATCAAGGCTAAATAAGGAGCTCCCACAATTGAGGGCAATGCCAGGAAATGCATATCCCATCGTTGATGATATCATTAGAAGACCTTCCTCATATGGATTTGAGGTAATAGAGAAGGGTTGTTGTTCCACAGGAACATTTGAGATGAGTTACTTATGCAGTGACAAGAATCCACTTACATGTCCTGACGCCACCAAATACATGTTTTGGGATGCCTTTCATCCTACCGAGAAGACAAATCGTATTGTCTCAAATTATTTAATTCCAAAGCTTCTAGCAACCTTCAATTAG 1050 0.4152 MERMSILWLVIITQILVLVSEGRNVPAVIVFGDSTVDSGNNNVIATVLKSNFRPYGRDFDGGQPTGRFSNGRVPPDFIAEAFGVKSSIPAYLDPAYTIQDFATGVCFASAGTGYDNATSAVLNVIPLWKEVEYYKEYQAKLRDHLGVEKANEIIGEALYLISLGTNDFLENYYVFPTRRLHFTVTQYEDFLVGIAENFVKELYSLGARKLSITGLVPIGCLPLERATNIVGYHGCNEEYNNVALEFNKKLENMISRLNKELPQLRAMPGNAYPIVDDIIRRPSSYGFEVIEKGCCSTGTFEMSYLCSDKNPLTCPDATKYMFWDAFHPTEKTNRIVSNYLIPKLLATFN. 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00710 349 Gene3D SGNH hydrolase 17 346 IPR036514 -
Seca7g00710 349 CDD SGNH_plant_lipase_like 26 343 IPR035669 -
Seca7g00710 349 SUPERFAMILY SGNH hydrolase 27 344 - -
Seca7g00710 349 FunFam GDSL esterase/lipase APG 18 344 - -
Seca7g00710 349 PANTHER GDSL ESTERASE/LIPASE EXL3 13 340 - -
Seca7g00710 349 Pfam GDSL-like Lipase/Acylhydrolase 28 340 IPR001087 GO:0016788
Seca7g00710 349 Coils Coil 247 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00710 Seca-Chr7 8311847 8318418 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00710 26 341 Pollen Coat Proteome AT1G75910 37.304 2.10e-65 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00710 - - gmx:100805486 607.831