Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00670 ATGTTGTGGACCACTACTACTAGTATTCCTCTGTTATTGTTCCTGGTAATAACTTTCTCCATCCCAGAAACACAAGCACAACAAGAATACGTTAACAACAAACAGCTAGATTGTGACAACGAATACAACTCCACAAAAGGCAATCTTTGCAACAGCATCCCTTCATGTCAATCTTACCTGACCTTCAAATCTTCCCCTCCTGAATACAACACCCCCACTTCAATCTCCTACCTTCTCAACTCAAAACCTTCCCTCATAGCCACATCCAACAACATCACCGATGTTGATCCCATCTCCACCGACACCATGATCACCATCCCCATCGATTGCTCCTGTTCCGGCAAATACTACCAACACAACGCTTCCTACACCTTGAAGAGAAAAGGGGAAACCTACTTCACTGTTGCCAACAACACCTACCAAGCTCTTACCACGTGTCAAGCTCTCATAGCTCAGAACACCTATGCGGTTCACAACCTTTTAGCTGGTGATAACCTCACTGTGCCTCTCAGGTGCGCTTGTCCTACCAAGAAACAGAGTGATGCAGGGTTCAAGTACTTGCTCACTTACCTTGTTTCTCAAGGGGAATCGTATTCTTCAATTGGTGATATCTTTGGTGTTGATGAACAGAGCATTTTGGATGCAAACGAGCTTTCTTCTAGTTCTGTTATTTTCTACTTTACACCCCTTTTGATTCCTCTTAAAAACGACCCACCCAAGAAGATACAGAGAGCAGCGTCTCCGCCGGAGAGTCCGCCGCCGCCGCTGATAACTCCGGCGGAGGACGATGGTTCCAGCTCTTCTAAGAAATGGGTTATTGTTGGTGTCATGGTTGGTGTTGTTTTGCTACTCTTAGTGGTTCTCCTTGTGTTTTTCCTCTGTTTCTATCGCCGCCGCCGGGAGGCTCCGGCGGCTCCGCCGCCGGAGCTTAAGGCTTTCTCGGATTCCACCACCAAGAAGATGTCGGATATTACCCCAACAACTCAATCATGGTCTCTTTCTTCTGAGGGGATTCGTTATGCTATTGAGTCTTTGACTGTTTACAAGTTTGAGGAGTTGCAGAATGCTACAGGGTTTTTCAGTGAAGAGAATAGGGTCAAAGGGTCTGTTTATAGAGCTTCTTTCAAGGGTGATGATGCTGCTGTTAAGATTCTTAAAGGGGATGTGTCTGCTGAGATTAACATTTTGAAGAGGATTAACCATGCTAATATTATAAGGTTGTCTGGTTTTTGTGTCTACAAAGGTAACACTTATCTTGTGTATGAGTTTGCTGAGAATGATTCTCTTGATGATTGGCTTCATTCTGAGAAGAAGTACCAGAATTCCATGTCTCTGAGTTGGACTCAGAGAGTTCAGATTGCTCATGATGTTGCTGATGCACTCAATTACCTTCATAATTATACTAACCCTCCTCATATTCATAAGAATTTGGAAAGTGGTAATGTTCTTTTGGATGGAAGTTTTAGAGCTAAAGTTTCAAACTTTGGGTTAGCAAGAGCTATGGAGAATCAAGGAGGAGATGAGGGGTTCCAATTGACAAGGCATGTGGTGGGGACTCAAGGTTACATGGCACCTGAGTATATTGAGAATGGTTTGATTACTCCAAAGATGGATGTTTTTTCATTTGGGGTTGTGATTTTGGAGCTTCTTTCAGGAAGAGAGGCTGTTAGTGGGGAGAAGAATGGATCAGGGGAGAAGCTTCTGTCAGCAACTGTGAGTCAAGTGCTTGAAGGAGAGAATGTTAGGGAGAAACTTAGAGGTTTCATGGATCCAACTTTGAGAGGTGAATACCCTTTGGATCTGGCATATTCCATGGCAGAGATTGCCAAACGATGTGTTGCTCGTGACCTCAATTCACGACCAAACATTTCTGAGGTTTTCATGACTCTGTCTAAGATTCAATCCTCTACACTGGATTGGGATCCATCTGATGAGTTTGAACGGTCCAGATCTGTTAGCCAAATCTCTGATAGCAGATAG 1980 0.4394 MLWTTTTSIPLLLFLVITFSIPETQAQQEYVNNKQLDCDNEYNSTKGNLCNSIPSCQSYLTFKSSPPEYNTPTSISYLLNSKPSLIATSNNITDVDPISTDTMITIPIDCSCSGKYYQHNASYTLKRKGETYFTVANNTYQALTTCQALIAQNTYAVHNLLAGDNLTVPLRCACPTKKQSDAGFKYLLTYLVSQGESYSSIGDIFGVDEQSILDANELSSSSVIFYFTPLLIPLKNDPPKKIQRAASPPESPPPPLITPAEDDGSSSSKKWVIVGVMVGVVLLLLVVLLVFFLCFYRRRREAPAAPPPELKAFSDSTTKKMSDITPTTQSWSLSSEGIRYAIESLTVYKFEELQNATGFFSEENRVKGSVYRASFKGDDAAVKILKGDVSAEINILKRINHANIIRLSGFCVYKGNTYLVYEFAENDSLDDWLHSEKKYQNSMSLSWTQRVQIAHDVADALNYLHNYTNPPHIHKNLESGNVLLDGSFRAKVSNFGLARAMENQGGDEGFQLTRHVVGTQGYMAPEYIENGLITPKMDVFSFGVVILELLSGREAVSGEKNGSGEKLLSATVSQVLEGENVREKLRGFMDPTLRGEYPLDLAYSMAEIAKRCVARDLNSRPNISEVFMTLSKIQSSTLDWDPSDEFERSRSVSQISDSR. 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00670 659 SMART LysM_2 189 233 IPR018392 -
Seca7g00670 659 SMART LysM_2 122 169 IPR018392 -
Seca7g00670 659 FunFam PTI1-like tyrosine-protein kinase 3 424 644 - -
Seca7g00670 659 SUPERFAMILY LysM domain 188 233 IPR036779 -
Seca7g00670 659 MobiDBLite consensus disorder prediction 245 259 - -
Seca7g00670 659 ProSiteProfiles Protein kinase domain profile. 356 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g00670 659 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 12 643 - -
Seca7g00670 659 MobiDBLite consensus disorder prediction 638 659 - -
Seca7g00670 659 MobiDBLite consensus disorder prediction 641 659 - -
Seca7g00670 659 Pfam Protein kinase domain 387 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g00670 659 ProSiteProfiles LysM domain profile. 188 232 IPR018392 -
Seca7g00670 659 SUPERFAMILY Protein kinase-like (PK-like) 340 627 IPR011009 -
Seca7g00670 659 Gene3D LysM domain 176 245 IPR036779 -
Seca7g00670 659 Gene3D Transferase(Phosphotransferase) domain 1 424 651 - -
Seca7g00670 659 Pfam LysM domain 190 233 IPR018392 -
Seca7g00670 659 MobiDBLite consensus disorder prediction 305 328 - -
Seca7g00670 659 Gene3D Phosphorylase Kinase; domain 1 333 423 - -
Seca7g00670 659 MobiDBLite consensus disorder prediction 241 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00670 Seca-Chr7 7456004 7457983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00670 1 652 Receptor kinase-like Gene Family AT2G33580 54.451 0.0 652
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Seca7g00670 Pkinase 2e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00670 - - gmx:100818534 973.385