Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00653 ATGTTGGAGTTTCCCTGGTTAGGAAGACACTTTGGCTCTGAAGTTGCTCGTCATGCCAAGAGACTTGGTATGAACGTTATTGCACATGATCCATATGCTCCTGCAGATCGCACTCGTGCTATTGGTGTGGAGCTTGTGAGCTTTGATGAGGCCATTGCCACTGCGGATTTCATCTCTCTGTTTGATAAGGAAATTGAAGATGCACTTCACCTGCAAGACCTCAATTGCAGCAATGTCTTTGTCAATGGGAATACTGGCCAGGTTAAGATTGGTGATCACTTTGGTTTAGCAGCAATTGTGGGCAAGAACCACTCTGCACATTCAATTATTGGGACACCAGAATTTATGGCACCTGAGTTATATGATGCGGACTACACAGAAATGGTGGACATATATATACTCATTTGGGATTATACTGATGTTTCTTTTGTCCTCTTTTGTTAA 444 0.4279 MLEFPWLGRHFGSEVARHAKRLGMNVIAHDPYAPADRTRAIGVELVSFDEAIATADFISLFDKEIEDALHLQDLNCSNVFVNGNTGQVKIGDHFGLAAIVGKNHSAHSIIGTPEFMAPELYDADYTEMVDIYILIWDYTDVSFVLFC. 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00653 147 SUPERFAMILY Protein kinase-like (PK-like) 73 132 IPR011009 -
Seca7g00653 147 Gene3D Transferase(Phosphotransferase) domain 1 71 134 - -
Seca7g00653 147 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 73 132 - -
Seca7g00653 147 ProSiteProfiles Protein kinase domain profile. 1 147 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g00653 147 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 11 61 IPR006140 GO:0051287
Seca7g00653 147 Pfam Protein kinase domain 72 132 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g00653 147 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 11 107 IPR036291 -
Seca7g00653 147 Gene3D - 8 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00653 Seca-Chr7 7262192 7262753 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00653 72 132 MAP Kinase Kinase Kinase AT5G55560 83.607 2.23e-30 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Seca7g00653 Pkinase 1.7e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00653 K08867 - gmx:100818126 114.39