Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00652 ATGGAATTCATGCTCAGATTATCACTTTTGTTCTTTTTGTTGGCCTCTATATCCTTCATTGCAGAATCAAAGTGTAGGAGTTGTGGTTTAGCTTTAGCTTCTTACTATCTCTGGGATGGTTCTAACCTGACATATGTTTCAAAGATTATGAAATCAGAGGTTCTCACAAAACCTGAAGATATTGTCAGTTACAACACAAACATCACAAACAACAAAGACACTGTACAATCCTTTACCAGGGTGAATGTTCCATTCCCTTGTGATTGCATCAATGGGGAGTTTCTAGGCCATACATTCCAATACTCAATTGGGTCAGGAGACACCTATTTGTCTGTTGCCAATGGGAACTATTCCAATTTGACCACTGCTGAGTGGTTGCAGAGCTTCAACCACTATAAACCAAATGATATTCCTGACACTGGAACACTTAATGTCACCATTAACTGTTCCTGCGGGAGCAGTGATGTTTCTAAGGAGTATGGATTGTTCATCACATACCCTCTTAGACCTGAAGATTCTTTGCAGTCAATTGCTAACCAGACTAACCTTGAGCCTGAGTTACTGCAGAAGTACAACCCTGGTGTGAATTTTAGCCAAGGGAGTGGTTTGGTTTATATTCCAGGAAAAGGTTTAGCAGGTGGGGTCATTGCTGGAATATCTGTTGGAGTAGTAGCAGGACTTCTACTATTAGCATTTTGTGTGTATGTTACATATTACCGAAGGAAGAAGTTTTGGAAGAAAATGTTGCTCTCAGAAGAAGCCAGTGTGAACTCTGCTCAAGTTATGAATGATGAGGTCTCTGGTAATGCTACATATGAAACTTCAGATTTTGGTGGTGCTAACACCATTGGTATTAGGGTGGACAAATCAGCGGAGTTTTCATATGAAGAACTTGCCAATGCCACAAATAATTTCAGTATGACTAACAAAATTGGTCAAGGTGGCTTTGGGGAAGTCTATTATGCAGAGCTGAACGGCGAGATCTCTTATAAAAAATCCTCTCTAATTACACAGAAAGCTGCAATAAAAAAGATGAACATGGATGCAGAAGGAGTATTTCTAGCTGAACTCAAAGTGTTGACACGTGTTCATCACTTGAACCTGGTACGCTTGATCGGATATTGCATTAAGGAATCCCTTTTCCTTGTCTATGAATACATTGAGAATGGAAACTTAAGGCAACATTTACGTAATTCAGATGGAAAACCTCTGCCATGGTCTACCCGGGTTCAAATTGCTCTGGATTCAGCCAGAGGTCTTGAATACATTCATGAGCATACAGTACCTACATATATCCATCGTGACATAAAGTCAGAAAATATTTTACTAGAAAAAAACTTCTGTGCAAAGGTTGCAGACTTTGGATTAACCAAGCTGATTGTTGGAAGTTCATCTATTCCCACTGCTAATATGGCAGGCACATTTGGTTACATGGCACCAGAATATGCATATGGCAGTGTTTCTCCCAAATTAGATGTCTATGCTTTTGGAGTTGTTCTTTGTGAACTAATTTCAGGTAAAGAAGCTGTGATCAAGGGTGATGTATCTGGTGCTGACTTAACAGGCCTTGTAACTCTGTTTGATGAAGTTTTTGATCAGCTAGATCCTCCAGAAGGTCTTAAAAAACTGGTGGATCCTACACTTGGAGATAATTACTCAATTGATTCAGTTTTTAAGGTGGCACAAATTGCCAAAGCATGTACAGAGAGAGATCCACAACGACGTCCAAATATGAGTACTGTTGTGGTTGCTCTTACCACACTTACTTCAAACACTGAGGATTGGGACATTACTTCCATCTACCAAAATCCTGCTCTTCCAGGGGAGACCTATACAACAGTGGCAAACAAGACCTTTTCCAATTTGACCACTGATGTGTTGATGCAAAGCTTCAACATTTATCGACCAACCAATATTCCTGATTTTGGAATCCTTAATGTCACTGTTAACTGTTCCTGTGGGAACAGTGAGGTTTCTATGGATTATGGGTTGTTCATCACATACCCTCTTAGACCTGAGGACACTTTGCAGTCCATTGCAAACCAGACCAAGATTGAGGCTGTGTTGCTGCAAAGGTACAACCCAGGTGTGGATTTCAGCCAAGGAAGTGGTCTGGTTTTCATTCCAGGGAAAGGTAAATTCTTATTCTGCTGTCATGGTTTGCAGGTTTGGTCTTCTGCTATGAATTCATTATGGGGTTTTTGTGCTTACTCTGAAGTTGGTTTTACATGTGCATGA 2238 0.403 MEFMLRLSLLFFLLASISFIAESKCRSCGLALASYYLWDGSNLTYVSKIMKSEVLTKPEDIVSYNTNITNNKDTVQSFTRVNVPFPCDCINGEFLGHTFQYSIGSGDTYLSVANGNYSNLTTAEWLQSFNHYKPNDIPDTGTLNVTINCSCGSSDVSKEYGLFITYPLRPEDSLQSIANQTNLEPELLQKYNPGVNFSQGSGLVYIPGKGLAGGVIAGISVGVVAGLLLLAFCVYVTYYRRKKFWKKMLLSEEASVNSAQVMNDEVSGNATYETSDFGGANTIGIRVDKSAEFSYEELANATNNFSMTNKIGQGGFGEVYYAELNGEISYKKSSLITQKAAIKKMNMDAEGVFLAELKVLTRVHHLNLVRLIGYCIKESLFLVYEYIENGNLRQHLRNSDGKPLPWSTRVQIALDSARGLEYIHEHTVPTYIHRDIKSENILLEKNFCAKVADFGLTKLIVGSSSIPTANMAGTFGYMAPEYAYGSVSPKLDVYAFGVVLCELISGKEAVIKGDVSGADLTGLVTLFDEVFDQLDPPEGLKKLVDPTLGDNYSIDSVFKVAQIAKACTERDPQRRPNMSTVVVALTTLTSNTEDWDITSIYQNPALPGETYTTVANKTFSNLTTDVLMQSFNIYRPTNIPDFGILNVTVNCSCGNSEVSMDYGLFITYPLRPEDTLQSIANQTKIEAVLLQRYNPGVDFSQGSGLVFIPGKGKFLFCCHGLQVWSSAMNSLWGFCAYSEVGFTCA. 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00652 745 Pfam Protein tyrosine and serine/threonine kinase 306 584 IPR001245 GO:0004672|GO:0006468
Seca7g00652 745 ProSitePatterns Protein kinases ATP-binding region signature. 311 344 IPR017441 GO:0005524
Seca7g00652 745 FunFam PTI1-like tyrosine-protein kinase 3 387 599 - -
Seca7g00652 745 ProSitePatterns Serine/Threonine protein kinases active-site signature. 431 443 IPR008271 GO:0004672|GO:0006468
Seca7g00652 745 SMART serkin_6 305 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g00652 745 Gene3D Transferase(Phosphotransferase) domain 1 387 603 - -
Seca7g00652 745 SUPERFAMILY Protein kinase-like (PK-like) 285 585 IPR011009 -
Seca7g00652 745 ProSiteProfiles Protein kinase domain profile. 305 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g00652 745 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 6 599 IPR044812 GO:0019199|GO:0045087
Seca7g00652 745 Gene3D Phosphorylase Kinase; domain 1 279 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00652 Seca-Chr7 7246196 7257568 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00652 609 711 Receptor kinase-like Gene Family AT3G21630 54.369 1.13e-29 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Seca7g00652 PK_Tyr_Ser-Thr 9.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00652 - K13429 mtr:11432279 875.159