Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00651 ATGGAACCCAAATCCAGATTATCAGTTTTCTTCTTGTCATGGGCCTGTTTATCGTGGAGTGTAGAGTCAAAGTGTAGCAGGGGTTGTGACTTAGCTTTAGCTTCCTACTATATATGGATAGGTTCCAACCTGACATATATTTCAGAGATTATGGAATCCCGGGTTCTTTCAAAACCTGAAGATATTGTTCTTTTAAATCCCGGGGTCTACAGAGATGCAATCCAAGTCTTCAGTAGGGTTAACATTCCTTTCCCTTGTGATTGCATTAATGGTGAGTTTCTGGGTCACACATTTCTGTACGAGATTCATCCACGGGATACCTATGAATCAGTTGCAAGCACGACCTTTTCCAATTTGACCACTGATGTGTGGATGCAAAGATTCAACATTTATTCACCAGACAATATTCCCGATTTTGGAAAAGTTAATGTGACGATTAACTGTTCCTGTGGGAACAGCAAGGTTTCCGAGGATTATGGGCTGTTCATCACATATCCACTTAGAGCTGAGGATACTTTGCAGTCCATTGCAGACCAGACCAAGCTTGAGGCTGAGTTGCTGCAGAGGTACAACCCGGGTGTGGATTTCAGCCAAGGAAGTGGTCTGGTTTTCATTCCAGGGAAAGACCAAAATGGTAGCTATGTGCCCCTTCACCCTAGCACAGGAGGTCTAGCAGGTGGAGCTATTGCTGGAATATCTATAGGAGTAATAGCAGGGGTTTTATTATTGGCATTTTGTGTGTATATTAAGTATCACCAAAAGAAGAAGGCACAATTGAAAAATTTGACCTTGGATAATTCCACGGTGAACTCTGCTGGAGTTAGTAAAGATTTTGGTGGTCCTTCTGTTGATGGTGGTGCTGACATCGCAGGCACTACGGTGGAAGAATCACGAGAGTTTTCATACAAAGAACTGGCCAATGCCACAAATAACTTCAGTATGGCTAATAAAATTGGTCAAGGTGGTTTTGGGGTAGTCTACTATGCAGAGCTGAGAGGGGAGAAAGCTGCCATCAAGAAGATGAATATGAAAGCAAAGACAGAATTTCTTGCTGAACTGAAAGTCTTAACTCATGTTCATCACTTAAACCTGGTACGTTTGATTGGATATTGTGTTGAGGGTTCTCTCTTCCTTGTATATGAATACATTGACAATGGAAACTTAAAACAGAATCTACATGATTCAGAAAGAGAACCTTTGTCATGGTCTACAAGGGTGCAAATTGCTCTGGATTCAGCCAGAGGTATTGAATACATTCATGAGCATACAATGCCTGTATATATTCATCGTGACATAAAGTCAGAAAATATTTTATTAGACAAAAGCTTCCGTGCAAAGGTTGCAGATTTTGGATTGACCAAGCTGGCTGAAGTTGGAAATTCAACCACTTCAGCAAAGGGTACATTCGGTTACATGCCACCAGAATATGTGTCAGGCAGGGTTTCTCCTTCTCCCAAGATAGATGTCTATGCCTTTGGAGTTGTTCTTTATGAACTTATTTCTGCTAAAGAAGCTGTAATCCAAGTTGGTGCTGAAACAAAAGGCCTTGTAGCTTTGTTTAGTGAAGTTTTTGGTCATCAACCAGACCCTATGGAAGGTCTTAAAAATCTGGTGGATCCTAGGCTTGGAGATAACTACCCAATTGATTCAGTTCACAAGATGGCACAACTTGCCAAAGCGTGCACCGAGGGTGATCCACAACGACGTCCAAGTATGAGATCTGTTGTGGTTGCTCTTATGACACTTACTTCAAATACTGAGGATTGGAATATTGCATCCTTCTATGAAAATCCATCCCTTGTAAATCTAATGTCTGGAAGATAG 1824 0.4139 MEPKSRLSVFFLSWACLSWSVESKCSRGCDLALASYYIWIGSNLTYISEIMESRVLSKPEDIVLLNPGVYRDAIQVFSRVNIPFPCDCINGEFLGHTFLYEIHPRDTYESVASTTFSNLTTDVWMQRFNIYSPDNIPDFGKVNVTINCSCGNSKVSEDYGLFITYPLRAEDTLQSIADQTKLEAELLQRYNPGVDFSQGSGLVFIPGKDQNGSYVPLHPSTGGLAGGAIAGISIGVIAGVLLLAFCVYIKYHQKKKAQLKNLTLDNSTVNSAGVSKDFGGPSVDGGADIAGTTVEESREFSYKELANATNNFSMANKIGQGGFGVVYYAELRGEKAAIKKMNMKAKTEFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIDNGNLKQNLHDSEREPLSWSTRVQIALDSARGIEYIHEHTMPVYIHRDIKSENILLDKSFRAKVADFGLTKLAEVGNSTTSAKGTFGYMPPEYVSGRVSPSPKIDVYAFGVVLYELISAKEAVIQVGAETKGLVALFSEVFGHQPDPMEGLKNLVDPRLGDNYPIDSVHKMAQLAKACTEGDPQRRPSMRSVVVALMTLTSNTEDWNIASFYENPSLVNLMSGR. 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00651 607 FunFam LysM receptor kinase 2 291 382 - -
Seca7g00651 607 SMART serkin_6 312 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g00651 607 ProSitePatterns Serine/Threonine protein kinases active-site signature. 427 439 IPR008271 GO:0004672|GO:0006468
Seca7g00651 607 Gene3D Phosphorylase Kinase; domain 1 287 382 - -
Seca7g00651 607 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 7 592 IPR044812 GO:0019199|GO:0045087
Seca7g00651 607 ProSiteProfiles Protein kinase domain profile. 312 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g00651 607 Gene3D Transferase(Phosphotransferase) domain 1 383 597 - -
Seca7g00651 607 FunFam PTI1-like tyrosine-protein kinase 3 383 593 - -
Seca7g00651 607 Pfam Protein tyrosine and serine/threonine kinase 314 578 IPR001245 GO:0004672|GO:0006468
Seca7g00651 607 SUPERFAMILY Protein kinase-like (PK-like) 295 579 IPR011009 -
Seca7g00651 607 ProSitePatterns Protein kinases ATP-binding region signature. 318 340 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00651 Seca-Chr7 7224632 7229972 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00651 19 607 Receptor kinase-like Gene Family AT3G21630 55.848 0.0 655
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Seca7g00651 PK_Tyr_Ser-Thr 5.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00651 - K13429 gmx:100803042 795.038