Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00650 ATGGAACCCAAATCCAGATTATCAGTTTTCTTCTTGTCATGGGCCTGTTTATCGTGGAGTGTAGAGTCAAAGTGTAGCAGGGGTTGTGACTTAGCTTTAGCTTCCTACTATATATGGATAGGTTCCAACCTGACATATATTTCAGAGATTATGGAATCCCGGGTTCTTTCAAAACCTGAAGATATTGTTCTTTTAAATCCCGGGGTCTACAGAGATGCAATCCAAGTCTTCAGTAGGGTTAACATTCCTTTCCCTTGTGATTGCATTAATGGTGAGTTTCTGGGTCACACATTTCTGTACGAGATTCATCCACGGGATACCTATGAATCAGTTGCAAGCACGACCTTTTCCAATTTGACCACTGATGTGTGGATGCAAAGATTCAACATTTATTCACCAGACAATATTCCCGATTTTGGAAAAGTTAATGTGACGATTAACTGTTCCTGTGGGAACAGCAAGGTTTCCGAGGATTATGGGCTGTTCATCACATATCCACTTAGAGCTGAGGATACTTTGCAGTCCATTGCAGACCAGACCAAGCTTGAGGCTGAGTTGCTGCAGAGGTACAACCCGGGTGTGGATTTCAGCCAAGGAAGTGGTCTGGTTTTCATTCCAGGGAAAGACCAAAATGGTAGCTATGTGCCCCTTCACCCTAGCACAGGAGGTCTAGCAGGTGGAGCTATTGCTGGAATATCTATAGGAGTAATAGCAGGGGTTTTATTATTGGCATTTTGTGTGTATATTAAGTATCACCAAAAGAAGAAGGCACAATTGAAAAATTTGACCTTGGATAATTCCACGGTGAACTCTGCTGGAGTTAGTAAAGATTTTGGTGGTCCTTCTGTTGATGGTGGTGCTGACATCGCAGGCACTACGGTGGAAGAATCACGAGAGTTTTCATACAAAGAACTGGCCAATGCCACAAATAACTTCAGTATGGCTAATAAAATTGGTCAAGGTGGTTTTGGGGTAGTCTACTATGCAGAGCTGAGAGGGGAGAAAGCTGCCATCAAGAAGATGAATATGAAAGCAAAGACAGAATTTCTTGCTGAACTGAAAGTCTTAACTCATGTTCATCACTTAAACCTGGTACGTTTGATTGGATATTGTGTTGAGGGTTCTCTCTTCCTTGTATATGAATACATTGACAATGGAAACTTAAAACAGAATCTACATGATTCAGAAAGAGAACCTTTGTCATGGTCTACAAGGGTGCAAATTGCTCTGGATTCAGCCAGAGGTATTGAATACATTCATGAGCATACAATGCCTGTATATATTCATCGTGACATAAAGTCAGAAAATATTTTATTAGACAAAAGCTTCCGTGCAAAGGTTGCAGATTTTGGATTGACCAAGCTGGCTGAAGTTGGAAATTCAACCACTTCAGCAAAGGGTACATTCGGTTACATGCCACCAGAATATGTGTCAGGCAGGGTTTCTCCTTCTCCCAAGATAGATGTCTATGCCTTTGGAGTTGTTCTTTATGAACTTATTTCTGCTAAAGAAGCTGTAATCCAAGTTGGTGCTGAAACAAAAGGCCTTGTAGCTTTGTTTAATGAAGTTTTTGATCACCAACCAGACCCTATGGAAGGTCTTAAAAATCTGGTTGATCCAAGGCTTGGAGATAACTACCCAATTGATTCAGTTCACAAGATGGCACAACTTGCCAAAGCTTGTACAGAGGGTGATCCACAACGACGTCCAACTATGAGATATGTTGTGGTTGCTCTTGTGACACTTACTTCAAACACTGAGGATTGGAATATTGCATCCTTCTATGAAAATCCAACCCTTGTTCCTCTCTGTGACCAAATGAAACTAAAAAATGGTTTACTCTTGTTCTTTCTGTTGCTTCACTATGTTTGTTTCAAGGTGGAATCCAAGTGTGTGAAGGGGTGTGATTTAGCTTTAGCTTCTTACTATGTCATGCCTAATATTTTTCTAGAAGGCAATATAACACGCATCATGAGATCAACAATTGTGTCCAATTCTGATGTTATTATCAGCTACAACAAAGGCAAAATATTCAATAATGATATTCTTCTAGCCTTTCTCAGACTCAACATTCCATTCCCATGTGACTGTATTGGTGGTGAATTTCTGGGGCATGTGTTTGAGTACACAACTAATGCAGGTGACACTTATGATTTGATTGCCAACAACTACTATGCCAATCTTACCACAGTTGAGCTTTTGAAAAGGTTCAATAGCTATGATCCAAATCATATACCTGCTAATGCCAAGATTAATGTCACTGTCAATTGTTCTTGTGGGGACAGTCAGATTTCAGAAGATTATGGGTTGTTTGTTACCTATCCTCTCAGGACTGGGGAAACACTGCAAGTTATTGCAAACCAAACCAGTCTTGATGCAGAGTTGCTGCAAAGTTACAATCCAAGTGTCAATTTCAACAAAGGGAGTGGAATAGTTTTCATTCCAGGAAGAGATCAAAATGGAGACTATGTTCCTTTATACCCTAGGAAAACAGGTCTAGCTACAAGTGCTGCTGTTGGTATATCTGTAGCAGGAATATGTGGCCTTCTATTATTCATAATTTGTATATATGTCAAATACTTCAAGAAGAAGGAAGAAGAGAAAGCTAAATTGCCAAAAGAAATTTCTGTGCCACTTTCAACTCAAGATGCTTCTAGTAGTGCAGAATATGAAACTTCAGGATCCTCTGGGCCTGCTCCTGGTAGTGTTGCTGGCCTTACAAGCATTATGGTGGCAAAATCAATGGAGTTTTCATATCAAGAACTAGCCAAAGCTACAAATAACTTCAGCTTGGAAAATAAAATTGGTCAAGGTGGATTTGGAGCTGTCTATTATGCGGAACTGAGAGGCGAGAAAACAGCAATTAAGAAAATGGACGTACAAGCATCAACAGAATTTCTTTGTGAGTTGAAGGTCTTAACACATGTTCATCACTTGAATCTGGTGCGCTTGATTGGATATTGCGTTGAGGGATCTCTATTCCTTGTATATGAATACATTGACAATGGAAACTTAGGCCAATATTTGCATGGTACAGGTAAAGATCCATTACCATGGTCTAGCAGAGTGCAAATTGCTCTTGATTCAGCAAGAGGCCTTGAGTACATTCATGAGCACACTGTGCCTGTGTATATCCATCGTGATGTAAAATCTGCAAATATATTGATAGACAAAAACTTTCGTGGAAAGGTTAAATTATATGCTCAATATGGTGATGTTTCTCCAAAAATAGATGTGTATGCTTTTGGAGTTGTTCTTTATGAACTTATTTCTGCAAAGAATGCTATTCTGAAGACAGGTGAATCTGTTGTTGAATCAAAGGGTCTTGTAGCTTTGTTTGAAGAAGCACTTAATCAAAGTGATCCTTTGGAAGGTCTTCGCAAACTGGTGGATCCTAGGCTTGGAGAAAACTATCCAATTGATTCTGTTCTCAAGATGGCCCAACTTGGGAGAGCTTGTACAAGAGATAACCCACTACTGCGCCCAAGTATGAGATCTATAGTTGTTGCTCTTATGACACTTTCATCACCTACTGAGGATTGTGATGATGATACTTCCTATGAAAATCAAACTCTCATAAATCTATTGTCAGTGAGATGA 3600 0.3975 MEPKSRLSVFFLSWACLSWSVESKCSRGCDLALASYYIWIGSNLTYISEIMESRVLSKPEDIVLLNPGVYRDAIQVFSRVNIPFPCDCINGEFLGHTFLYEIHPRDTYESVASTTFSNLTTDVWMQRFNIYSPDNIPDFGKVNVTINCSCGNSKVSEDYGLFITYPLRAEDTLQSIADQTKLEAELLQRYNPGVDFSQGSGLVFIPGKDQNGSYVPLHPSTGGLAGGAIAGISIGVIAGVLLLAFCVYIKYHQKKKAQLKNLTLDNSTVNSAGVSKDFGGPSVDGGADIAGTTVEESREFSYKELANATNNFSMANKIGQGGFGVVYYAELRGEKAAIKKMNMKAKTEFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIDNGNLKQNLHDSEREPLSWSTRVQIALDSARGIEYIHEHTMPVYIHRDIKSENILLDKSFRAKVADFGLTKLAEVGNSTTSAKGTFGYMPPEYVSGRVSPSPKIDVYAFGVVLYELISAKEAVIQVGAETKGLVALFNEVFDHQPDPMEGLKNLVDPRLGDNYPIDSVHKMAQLAKACTEGDPQRRPTMRYVVVALVTLTSNTEDWNIASFYENPTLVPLCDQMKLKNGLLLFFLLLHYVCFKVESKCVKGCDLALASYYVMPNIFLEGNITRIMRSTIVSNSDVIISYNKGKIFNNDILLAFLRLNIPFPCDCIGGEFLGHVFEYTTNAGDTYDLIANNYYANLTTVELLKRFNSYDPNHIPANAKINVTVNCSCGDSQISEDYGLFVTYPLRTGETLQVIANQTSLDAELLQSYNPSVNFNKGSGIVFIPGRDQNGDYVPLYPRKTGLATSAAVGISVAGICGLLLFIICIYVKYFKKKEEEKAKLPKEISVPLSTQDASSSAEYETSGSSGPAPGSVAGLTSIMVAKSMEFSYQELAKATNNFSLENKIGQGGFGAVYYAELRGEKTAIKKMDVQASTEFLCELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIDNGNLGQYLHGTGKDPLPWSSRVQIALDSARGLEYIHEHTVPVYIHRDVKSANILIDKNFRGKVKLYAQYGDVSPKIDVYAFGVVLYELISAKNAILKTGESVVESKGLVALFEEALNQSDPLEGLRKLVDPRLGENYPIDSVLKMAQLGRACTRDNPLLRPSMRSIVVALMTLSSPTEDCDDDTSYENQTLINLLSVR. 1200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00650 1199 Gene3D Phosphorylase Kinase; domain 1 909 999 - -
Seca7g00650 1199 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 7 592 IPR044812 GO:0019199|GO:0045087
Seca7g00650 1199 FunFam PTI1-like tyrosine-protein kinase 3 383 593 - -
Seca7g00650 1199 Pfam Protein tyrosine and serine/threonine kinase 930 1062 IPR001245 GO:0004672|GO:0006468
Seca7g00650 1199 Pfam Protein tyrosine and serine/threonine kinase 314 577 IPR001245 GO:0004672|GO:0006468
Seca7g00650 1199 Gene3D Phosphorylase Kinase; domain 1 287 382 - -
Seca7g00650 1199 ProSiteProfiles Protein kinase domain profile. 312 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g00650 1199 ProSitePatterns Serine/Threonine protein kinases active-site signature. 427 439 IPR008271 GO:0004672|GO:0006468
Seca7g00650 1199 Gene3D Transferase(Phosphotransferase) domain 1 1067 1194 - -
Seca7g00650 1199 Gene3D Transferase(Phosphotransferase) domain 1 383 596 - -
Seca7g00650 1199 FunFam LysM receptor kinase 2 291 382 - -
Seca7g00650 1199 Pfam LysM domain 709 753 IPR018392 -
Seca7g00650 1199 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1044 1056 IPR008271 GO:0004672|GO:0006468
Seca7g00650 1199 Gene3D Transferase(Phosphotransferase) domain 1 1000 1066 - -
Seca7g00650 1199 ProSiteProfiles Protein kinase domain profile. 929 1199 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g00650 1199 SUPERFAMILY Protein kinase-like (PK-like) 910 1171 IPR011009 -
Seca7g00650 1199 SMART serkin_6 929 1173 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g00650 1199 SMART serkin_6 312 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g00650 1199 FunFam LysM receptor kinase 2 908 999 - -
Seca7g00650 1199 SUPERFAMILY Protein kinase-like (PK-like) 295 579 IPR011009 -
Seca7g00650 1199 ProSitePatterns Protein kinases ATP-binding region signature. 935 957 IPR017441 GO:0005524
Seca7g00650 1199 ProSitePatterns Protein kinases ATP-binding region signature. 318 340 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00650 Seca-Chr7 7201714 7212868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00650 19 603 Receptor kinase-like Gene Family AT3G21630 55.556 0.0 648
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Seca7g00650 PK_Tyr_Ser-Thr 1.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00650 - K13429 gmx:100792559 917.531