Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00636 ATGTACATTAAGCAGGTTGTAATTGAAGGTTTTAAGAGTTACCGGGAGCAAATCGCCACAGAGGCTTTCAGTCCTAAAGTTAATTGTGTTGTTGGTGCTAATGGATCTGGGAAGACAAACTTTTTCCATGCCATTCGTTTTGTGTTGAGTGATCTCTTCCAGAATCTACGCAGCGAAGATAGACACGCACTACTCCATGAAGGAGCTGGACACCAGGTTTTATCTGCATTTGTGGAGATTGTCTTTGATAATTCAGACAATCGTATCCCGGTTGACAAGGAAGAAGTGCGGTTGCGCCGGACCATTGGTTTGAAAAAGGATGAGTATTTTCTAGATGGAAAACACATAACAAAAACTGAAGTGATGAATTTATTGGAAAGTGCTGGGTTCTCTCGCTCAAATCCTTATTATGTTGTGCAACAAGGAAAGATAGCATCACTAACCTTGATGAAAGACTCTGAACGACTGGATTTGCTGAAGGAAATTGGTGGTACTAGAGTGTATGAGGAACGGCGTCGTGAAAGTTTGAAAATAATGCAGGAAACTGGTAATAAAAGAAAGCAAATAATCCAAGTTGTACAGTATTTAGATGAGAGATTGAGGGAACTAGATGAGGAGAAAGAGGAACTTAGAAAATATCAGCAGCTTGACAAGCAGAGAAAATCCTTGGAATATGCTATTTATAGCAAAGAAGTTCAAGATGCTCAGCAAAAACTTACAGAGATAGAAGAAGCTCGGACCAAGGTTTCTGAAACATCAGCAAAGAAGTATAATGATGTTCTTGATGCACATGAAAAATCCAAAGATTTAGAGAATACATTGAAAGATGTAACAAAAGAACTCCAGAACTTTAACAAAGAGAGAGAAGTAATTGAAAAGCGACGAACAGCGGCATTAAAGAAGCACACAGAGCTTGAGCTTGATGTCAAAGACTTACAAGAGAAGATCTCTGGAAATATCCGAGCCAAAGAAGATGCTGCAAGACAACTTGAGATACTGGAGAAAGAAATTCAAGATTCAATGGATGAGCTGGACAAAATCAGTCCATTATATGAGGATCAAGTTAAGAAAGAAAAAGACATTACCAAGCGAATAATGGAGCGTGAGAAGAAACTCAGTATACTTTATCAAAAGCAAGGACGTGCAACCCAGTTTTCGAGTAAAGCTGCTCGTGATAAGTGGCTTCAAAAGGAGATTGATGATCTTGAAAGGGTGCTTTCTTCAAACACAGGGCAGGAGCAAAAACTTATGGAAGAAATTGACCGGCTTAATGGTGAACTACGCGATTGTGATGAGTACATCAAGAGCCGTAAAGCAGATATTACTACTTTAGAATCTCTCATTGCTCAGTCACGTGAAGGGTTTAATTATCATAAAGTAGAAAGAGACAAGTTGCAAGATGAGAGGAAGTCCCTATGGGGCAAAGAGAATGAGCTTACTGCTGAAATTGATAAGCTGAGAGCAGAAGTTGAGAAGGCTGAAAAGAGTCTTGATCATGCAATTCCTGGTGATGTGAGAAGAGGGTTGAATTCAGTTCGGAAGATCTGCAGGGAGTATAACATTGCTGGAGTTCATGGTCCGATTATTGAATTGCTGAATTGTGATGAGAAATTTTTCACTGCAGTTGAAGTTACTGCAGGAAACAGCTTATTTCATGTGGTTGTTGAAAATGATGACAAGTCAACCCAGATAATTAGACATCTTAATTCACAGAAAGGTGGCCGAGTTACATTTATTCCACTTAACAGAGTAAAGGCTGCACACATCACTTATCCACAGAGTTCTGATGTCATACCTCTTTTGAAGAAATTAAATTTTAAACTTGAGCATACTCCGGCATTCAGTCAGGTATTTTCTAGAACAGTTATCTGCAAGAACCTGGATGTGGCTTCAAGGGTTGCTCGAACTGATGGTCTGGACTGCATAACACTGGAAGGTGATCAAGTAAGCAAGAAAGGTAGTATGACTGGAGGATTTTATGATCACAGGAGATCAAAATTGAAGTTTATGAATATCATTAAGCAGAATACAGAAAATATTCGCAAGAAGGAGGAGGAATTGGATAAAGTTAGATTTAGTCTACAAGAGATAGATCAAAAGATTAATGAACTTGTTGCTGAGCAGCAGAAGATTGATGCCAAGCGTGCTCATGACAAATCAGAGTTGGAACAGCTTAAGCAGGACATTGCTAATTCTAACAAGCAGAAGCAATTGATTTCTAAAGCAATTGCAAAGAAGGATAAGTCACTTGTGGATGTTCAGAATCAGATTGAACAGCTTAAGGCTAGTATGGCAATGAAAAAAGCAGAGATGGGCACGGAGCTCATTGATCATTTAACGCCAGAGGAAAAAAAACTTTTGTCAGATTTGAACCCTGAAATCAAAGACCTTAAAGAGAAGCTTGTTGCTTGCAAGAATGATCGCATTGAGACTGAAGCACGGAAAGCCGAGCTGGAAACTAATCTAACTACTAACCTTAGGAGAAGAAAACAAGAGCTGGAGGCTGTAATATCATCTGTGGATGCTGACTCTTTAGTTGTTGATGCTGAATTGAAGGGGCAGGAACTTAGTGATGCTAAACTATTGGTTGATGATGCATCAGGGCAGCTTAGAAGAGTTTCTGAAAGTATAAATGATCGAACAAGGCAAATTAAAAAGATCAAAGATGAAATGAATAAATTGAAGTCTTTGGAGGATGAGTATGAAAGAAAGCTTCAGGAAGAAGCAAAAGAATTAGAGCAATTGCTTAGTAAAAAAAATGTATATTCTGCTAAAGAAGAGGAATATACCAAGAAAATAAGGGAACTGGGCCCATTGTCGTCAGATGCTTTTGAGACGTACAAACGGAGGAGTATTAAAGATTTGCAAAAAATGCTGCATAGATGCAATGAGCAATTGCAACAGTTTAGTCATGTAAACAAGAAAGCACTTGATCAGTACATAAATTTTACAGAACAAAGAGAAGAACTTCAGAAAAGGCAAGCTGAACTTGATGCAGGAGATGAGAAAATTAGAGAACTAATATCAGTGCTAGATCAACGGAAGGATGAATCAATAGAACGCACTTTCAAAGGTGTTGCCAGGCATTTTCGAGAAGTATTTTCTGAACTTGTGCAGGGGGGCCATGGTCACCTGGTTATGATGAAGAAGAAGGATGGTGATCATGATGATGATGATCAAGATGAGGATGGTCCTCGTGAAGCAAATCCAGAGGGGAGAGTAGAGAAGTACATTGGAGTGAAAGTGAAGGTCTCTTTTACTGGGCAAGGGGAGACACAGTCCATGAAGCAGTTGTCTGGGGGTCAAAAAACTGTTGTAGCCCTAACACTTATCTTTGCCATACAGCGATGTGATCCTGCCCCCTTTTATCTATTTGATGAGATTGATGCAGCACTGGATCCTCAGTACAGAACTGCTGTTGGAAGTATCCATTTTATTATTATGTTCGCTACCCCGTCATGTCAAATGACTGGTCCTGCGCTTCTTCCATCTGTATTTACTGCATGCTGCATCTACCATCTTCACTTTTCTTTTTTAATTTTTTCAAGTGTTGCCTGCATATATTCCTCATAG 3573 0.3927 MYIKQVVIEGFKSYREQIATEAFSPKVNCVVGANGSGKTNFFHAIRFVLSDLFQNLRSEDRHALLHEGAGHQVLSAFVEIVFDNSDNRIPVDKEEVRLRRTIGLKKDEYFLDGKHITKTEVMNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMQETGNKRKQIIQVVQYLDERLRELDEEKEELRKYQQLDKQRKSLEYAIYSKEVQDAQQKLTEIEEARTKVSETSAKKYNDVLDAHEKSKDLENTLKDVTKELQNFNKEREVIEKRRTAALKKHTELELDVKDLQEKISGNIRAKEDAARQLEILEKEIQDSMDELDKISPLYEDQVKKEKDITKRIMEREKKLSILYQKQGRATQFSSKAARDKWLQKEIDDLERVLSSNTGQEQKLMEEIDRLNGELRDCDEYIKSRKADITTLESLIAQSREGFNYHKVERDKLQDERKSLWGKENELTAEIDKLRAEVEKAEKSLDHAIPGDVRRGLNSVRKICREYNIAGVHGPIIELLNCDEKFFTAVEVTAGNSLFHVVVENDDKSTQIIRHLNSQKGGRVTFIPLNRVKAAHITYPQSSDVIPLLKKLNFKLEHTPAFSQVFSRTVICKNLDVASRVARTDGLDCITLEGDQVSKKGSMTGGFYDHRRSKLKFMNIIKQNTENIRKKEEELDKVRFSLQEIDQKINELVAEQQKIDAKRAHDKSELEQLKQDIANSNKQKQLISKAIAKKDKSLVDVQNQIEQLKASMAMKKAEMGTELIDHLTPEEKKLLSDLNPEIKDLKEKLVACKNDRIETEARKAELETNLTTNLRRRKQELEAVISSVDADSLVVDAELKGQELSDAKLLVDDASGQLRRVSESINDRTRQIKKIKDEMNKLKSLEDEYERKLQEEAKELEQLLSKKNVYSAKEEEYTKKIRELGPLSSDAFETYKRRSIKDLQKMLHRCNEQLQQFSHVNKKALDQYINFTEQREELQKRQAELDAGDEKIRELISVLDQRKDESIERTFKGVARHFREVFSELVQGGHGHLVMMKKKDGDHDDDDQDEDGPREANPEGRVEKYIGVKVKVSFTGQGETQSMKQLSGGQKTVVALTLIFAIQRCDPAPFYLFDEIDAALDPQYRTAVGSIHFIIMFATPSCQMTGPALLPSVFTACCIYHLHFSFLIFSSVACIYSS. 1191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00636 1190 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 253 IPR027417 -
Seca7g00636 1190 Coils Coil 870 925 - -
Seca7g00636 1190 Coils Coil 260 315 - -
Seca7g00636 1190 Gene3D - 395 488 - -
Seca7g00636 1190 Coils Coil 218 252 - -
Seca7g00636 1190 FunFam Structural maintenance of chromosomes 3 1 197 - -
Seca7g00636 1190 Coils Coil 680 770 - -
Seca7g00636 1190 Coils Coil 794 821 - -
Seca7g00636 1190 MobiDBLite consensus disorder prediction 1047 1072 - -
Seca7g00636 1190 Coils Coil 193 216 - -
Seca7g00636 1190 Pfam RecF/RecN/SMC N terminal domain 2 1142 IPR003395 -
Seca7g00636 1190 Gene3D - 985 1150 IPR027417 -
Seca7g00636 1190 CDD ABC_SMC3_euk 3 166 IPR041741 GO:0005524|GO:0016887
Seca7g00636 1190 PIRSF SMC 1 1135 IPR024704 GO:0005524|GO:0016887
Seca7g00636 1190 Gene3D - 582 661 - -
Seca7g00636 1190 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3 1 1142 - -
Seca7g00636 1190 SUPERFAMILY Smc hinge domain 474 678 IPR036277 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Seca7g00636 1190 Coils Coil 323 343 - -
Seca7g00636 1190 Pfam SMC proteins Flexible Hinge Domain 522 633 IPR010935 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Seca7g00636 1190 SMART SMC_hinge_2 522 634 IPR010935 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Seca7g00636 1190 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 966 1141 IPR027417 -
Seca7g00636 1190 Gene3D - 1 178 IPR027417 -
Seca7g00636 1190 Coils Coil 476 496 - -
Seca7g00636 1190 Gene3D - 511 664 - -
Seca7g00636 1190 Coils Coil 973 993 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00636 Seca-Chr7 6981119 7007087 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00636 1079 1174 Structural Maintenance of Chromosomes family AT5G15920 28.431 1.53e-06 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00636 K06669 - gmx:100810448 1993.78