Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00626 ATGACTAGAACTAGGAGTATCGCTATCACACTCTTGTTAGTTATTTCCTTCTTGCATATTGCCTCTGCTCTGGTCTCTGATGATGGGGTGACTCTGTTATCGCTCTTGAAAAGCTGGACCTTTGTTCCTTCTAACATCAGCACAAGTTGGAATGCCTCTGATTCTATTCCATGCTCATGGGTTGGAGTTCAATGCGACCATGCCCACAATGTGATCTCCCTTAACCTAACTCATCAAGGTATTTCTGGTCAACTTGGAACAGAAATTGGAAATTTGTATCACTTGCAGACCCTTGTGTTGTTGGGTAATGGTTTCTCAGGAAAAATACCGTCAGAGTTAAGTAACTGTAGTTTACTTGTGTATTTAGACCTTTCTGGAAACAGCTTCAGTGGACAGATACCATATAGCTTTAAAAAGTTGCAAAATTTAAAGTGTTTGAGCTTGTCTTCTAATCTGCTGACAGGTGAAATTCCAGATTCCTTGTTTCAAATTTCTTCTCTGGAAGAACTGAGGCTGCATAGTAACCTTCTTAGTGGTCCTGTCCCAACCAATATTGGGAACTTGACCAAACTATTGAGGTTGTATCTATATGGTAATCAGTTGTCAGGGACTATTCCTTCATCCATTGGTAATTGCAGTAAATTAGAGGACCTTGAGTTGTCTTTCAACCGTTTGACAGGTGAAATTCCAGTCAGTGTTTGGAGAATTCCAAGTCTTAAGCACGTCTTGGTGCACAACAACAGCCTTTTTGGGGAACTTCCTTTGGAGATGACAAATCTCAAGCATCTAAAAAATGTCTCATTGTTTGACAACCAGTTCTCCGGAGTCATACCTCAAAGCTTGGGAATCAACAGCAGCTTGGTGAAGTTGGACTGTATGAATAATAAGTTCACTGGTAATATCCCACCCAATCTTTGCTTTGGAAAGCAATTGATTGAGCTCAATATGGGAATTAATCAACTTCAAGGTGGCATACCTTCTGATGTAGGGAGATGTGTAACTCTAAGGAGGTTGATTCTCAAAGAAAATAATTTCACTGGTTCTCTGCCTGACTTTGAAAGTAATATGAACCTCATATACATGGACATAAGCAAGAACAATATCAGTGGACCAATTCCATCAAGTTTGGGAAATTGCATAAACCTCACTTGCATTAATTTGTCAATGAACAAATTTACTGGGCCAATACCTTCTCAGTTTGGAAAGCTTGTGAATCTTGTGATTTTGGATCTTGCTCACAACAACTTGGAAGGTACTTTGCCACCTCAGCTATCAAATTGTACTAAAATGGATCGTTTTGATGTGGGATTCAATTTCCTAAATGGCTCACTCCCATCAAATTTGAGTAGTTGGACAGGGATAACCACGTTGATTTTAAGGGAGAATCATTTTTCAGGGGGTATCCCAGACTTTTTGGCAAAATTTAACAACCTTCGTGAGTTACAACTTGGTGGAAATTTGTTTGGAGGCAAAATTCCTCAACCAATAGGATCATTGCAGAATCTGTTCTATGGATTGAATCTAAGTGCTAATGGATTGACAGGTGACATTCCTGCAGAAATTAGAAATCTGAAACTGCTGCAAAGTCTTGATATATCCTTGAACAATTTGACAGGAAACATAAGTTTTATTAATGGTCTTCTTTCATTAATTGAGGTCAATATTTCTTACAATTTCTTTGATGGTCCTGTACCTACAGGGCTAATGAAGTTATTGAATTCCTCACCTTCATCATTCATGGGCAATCCTCTTCTTTGTGTTAGTTGCTTGAATTGCATTAAAACTAGTTATCTGAAGCCTTGTGTCTACATATCAACTGATCACAAAGGTATCAGTAAATCAACTGATCACAAAGGTATCAGTAAAATTGGAATTGTGATGATGATAGAATTTGGATCCTCAGTAATTATGTCTGCCATTCTGCTAATAATAATTCGAATGTATCTCCTCAGAAGATATAAGCAGGAATTCAATGAGCAATGGGGAATTGATTCTGCCTCTGATTACCCAGAGTCATTTATTGAAAGAGGAGGTGGACGGAGGATCGGATTCATGTATGAGCGTGAAGTGAACATCTTAGCTGAAAAGAAGCCATCTGCCCTTCAGGACCTAGTGTTGAAGGCTACAGAGAACCTAGATGATCAGTATATTGTTGGCATAGGAGCACATGGTATTGTGTATAAAGCCCAACTAGGTGAACTGGTTTTTGCTGCAAAGAAGGTTGCATTTGCAAGGAACAAGCAAAGGTGCCTAAGTATCATGCACAAAGAAATTAAAGTCATTGGGATGTTTAAGCATCGGAATTTGATCACTTATGCAGACTACTGGTTTGGAGAGGACTATGGTTTAATCTTATATGAGTTTATGGAAAATGGAAGCCTTCATGATGTTTTGCATGAAAAGAAACCCCCACCAGCATTAACATGGAATGACCGGTTTAAGATAGCTGTTGGAATTGCTGAAGGACTAGCATATCTGCATTATGATATTAGCCCACCCATAGTGCACAGAGACATCAAACCAAAGAATATACTTCTTGATGCTAATATGGAGCCTCTTATAGCTGATTTTGGCACTGCTCTGTACAGGAACCTGTCTGAGGATTCTAATACTTATTCTGGAACCAGGAAAATGCTATCATCCAACGTTGCTGGTACCCCTGGCTATATTGCACCAGAGAATGCATATGCAATAGTTCAGAGCAGAAAGTCTGATGTATATAGCTATGGGGTTGTTTTGCTTGAGCTAATAACCAGAAAGAAAGTTATAATTCAATCATTGAATAATGAGGCAGAGGTGACCACTTTAATACGTTGGGCTAGATCTGTATGGCTGGAGACAGGAAAAATTGAGAAGATTGCTGATCCATATCTAGCAAGTGCATTCCCCAATTCAGTAGCACTAGCCAAGCAGGTCACTGCAGTGTTTTTGTTGGCATTACAATGCACAGAAAGAGAACCACATCAGAGACCGACCATGAAAGATGTTATTGGCTTTTATAAACGGAAAGTGTTCCAGTTGAGGTGTGATGGTGTGGTTTATGGTGATGAAGTTGATGTTGATGTAGCACCACAACAACCATGTGGCTCTCTTAATCTCTCATCTGATGTTCCAGTTGTCGGTATTGACCACCATCTCCATGGTGAAACTGAAAGTAGTAGTGCTGCAACCCTGAGACAAAAAGAAGTTACATTTACTGGTGGAATCTTTCCTTGGGATGATTGGAAACTCATGTTTAGACCTACAATCGATATTGATGGACTTGTAATTAAACCAATAGGAGACGGTAAGATTCAGGCTGAAAAGGTAGTGGTAGCTGCTCTAATTGTTCCAAAAATAACCTATGCATGGTCTTGGTGGTTCTACCTTCCCTCCATCACTGGTCCAGTAGTTACCACAGCCTTCAATTGGTTTTTCCTCTCACGTTGGGTTCAATATATGCACCAGCAGACATCATTGTATTCACAGCCCAAATCATACTTTATAAACACCAAATCAAGGCTACCCACCAACTCAGTGAGTAGCCATGGAAGAATTCCAAAGGAAAGGTTCTTTAAAGGCAATACTCTCCAATCTTTGGGTCATGGAGAAAGAGATGTCCATAATTCTAAATGTCTAAATTAA 3624 0.3943 MTRTRSIAITLLLVISFLHIASALVSDDGVTLLSLLKSWTFVPSNISTSWNASDSIPCSWVGVQCDHAHNVISLNLTHQGISGQLGTEIGNLYHLQTLVLLGNGFSGKIPSELSNCSLLVYLDLSGNSFSGQIPYSFKKLQNLKCLSLSSNLLTGEIPDSLFQISSLEELRLHSNLLSGPVPTNIGNLTKLLRLYLYGNQLSGTIPSSIGNCSKLEDLELSFNRLTGEIPVSVWRIPSLKHVLVHNNSLFGELPLEMTNLKHLKNVSLFDNQFSGVIPQSLGINSSLVKLDCMNNKFTGNIPPNLCFGKQLIELNMGINQLQGGIPSDVGRCVTLRRLILKENNFTGSLPDFESNMNLIYMDISKNNISGPIPSSLGNCINLTCINLSMNKFTGPIPSQFGKLVNLVILDLAHNNLEGTLPPQLSNCTKMDRFDVGFNFLNGSLPSNLSSWTGITTLILRENHFSGGIPDFLAKFNNLRELQLGGNLFGGKIPQPIGSLQNLFYGLNLSANGLTGDIPAEIRNLKLLQSLDISLNNLTGNISFINGLLSLIEVNISYNFFDGPVPTGLMKLLNSSPSSFMGNPLLCVSCLNCIKTSYLKPCVYISTDHKGISKSTDHKGISKIGIVMMIEFGSSVIMSAILLIIIRMYLLRRYKQEFNEQWGIDSASDYPESFIERGGGRRIGFMYEREVNILAEKKPSALQDLVLKATENLDDQYIVGIGAHGIVYKAQLGELVFAAKKVAFARNKQRCLSIMHKEIKVIGMFKHRNLITYADYWFGEDYGLILYEFMENGSLHDVLHEKKPPPALTWNDRFKIAVGIAEGLAYLHYDISPPIVHRDIKPKNILLDANMEPLIADFGTALYRNLSEDSNTYSGTRKMLSSNVAGTPGYIAPENAYAIVQSRKSDVYSYGVVLLELITRKKVIIQSLNNEAEVTTLIRWARSVWLETGKIEKIADPYLASAFPNSVALAKQVTAVFLLALQCTEREPHQRPTMKDVIGFYKRKVFQLRCDGVVYGDEVDVDVAPQQPCGSLNLSSDVPVVGIDHHLHGETESSSAATLRQKEVTFTGGIFPWDDWKLMFRPTIDIDGLVIKPIGDGKIQAEKVVVAALIVPKITYAWSWWFYLPSITGPVVTTAFNWFFLSRWVQYMHQQTSLYSQPKSYFINTKSRLPTNSVSSHGRIPKERFFKGNTLQSLGHGERDVHNSKCLN. 1208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00626 1207 Gene3D Ribonuclease Inhibitor 26 180 IPR032675 -
Seca7g00626 1207 ProSiteProfiles Protein kinase domain profile. 712 1005 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g00626 1207 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 330 995 - -
Seca7g00626 1207 SUPERFAMILY RNI-like 266 574 - -
Seca7g00626 1207 Gene3D Ribonuclease Inhibitor 283 357 IPR032675 -
Seca7g00626 1207 Gene3D Ribonuclease Inhibitor 358 593 IPR032675 -
Seca7g00626 1207 Gene3D Ribonuclease Inhibitor 181 281 IPR032675 -
Seca7g00626 1207 ProSitePatterns Serine/Threonine protein kinases active-site signature. 834 846 IPR008271 GO:0004672|GO:0006468
Seca7g00626 1207 Gene3D Phosphorylase Kinase; domain 1 694 788 - -
Seca7g00626 1207 SMART serkin_6 712 1005 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g00626 1207 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
Seca7g00626 1207 Pfam Protein kinase domain 717 996 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g00626 1207 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 24 183 - -
Seca7g00626 1207 SUPERFAMILY Protein kinase-like (PK-like) 702 997 IPR011009 -
Seca7g00626 1207 SUPERFAMILY L domain-like 65 350 - -
Seca7g00626 1207 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 789 1003 - -
Seca7g00626 1207 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 309 595 - -
Seca7g00626 1207 ProSitePatterns Protein kinases ATP-binding region signature. 718 740 IPR017441 GO:0005524
Seca7g00626 1207 Gene3D Transferase(Phosphotransferase) domain 1 789 1007 - -
Seca7g00626 1207 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 185 281 - -
Seca7g00626 1207 SMART LRR_typ_2 140 164 IPR003591 -
Seca7g00626 1207 SMART LRR_typ_2 188 212 IPR003591 -
Seca7g00626 1207 SMART LRR_typ_2 403 427 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00626 Seca-Chr7 6881254 6885956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00626 68 997 Receptor kinase-like Gene Family AT1G73080 44.560 0.0 734
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Seca7g00626 Pkinase 2.9e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00626 - - tpra:123924637 1562.36