Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00581 ATGGGGAATCAGACAATTGATTCTCAAAGTAATGGGCAACAATCTCATTTACAGCCTCCACAGTTAGATAAGCAAAGCTCATTGTATAGTCTCACTCTTGATGAGGTTAAAAGTCCACTTGGAGACACGGGGAATCCATTAGGGAGCATGAACCTCGATGAGCTTCTGCAAAATGTATGGACTGTTGAAGCAAATAAGGTTGTAGGGATAGAGAATGAGCATGTGTCGTCATCGTCTTCTCTTCAATGCCAGGCTAGTCTGACCTTGGCCCAAGCTTTAAATGGGAAGACAGTGGATGATGTATGGAGAGAAATCCAACAAGGCCAGAAGAAACGATATGGAGATGATATGAAAATTCAAGATAGAGAAATGACTCTTGGTGATACAACATTAGAAGACTTCCTAGTGCAAGCAGGGCTTTTTGCTGAAGCTTCTGTTAGTCCTATTATGGGGTTTGATGCAATGGATACCACAGCCCCTCAAAGTTTTCAACAAATAATGGGCTTGTCCCCCTGTCCTTCAATGAGCAGTTTATCAGAAACAAAACCAGGTCGCAAAAGGGATGCTCCAGATGCATATGAGAAGGCTTTGGAAAGGAGGCCGATGAGGAAAATCAAGAATAGGGAATCTGCTGCACGCTCACGAGCAAGAAAAAAGGTTGCTTACCATAATGAACTGGTTAGCAAGGTTACTCGACTAGAGCAGGAAAATATAAAGCTCAAGAAAGAAAAGGAGTTTGAGCAGAGGCTACCACCTGATTCAGCAACTGAACCAACATATCAGCTTCGAAGAATAAGTTCTGCCAAATTCTGA 813 0.4256 MGNQTIDSQSNGQQSHLQPPQLDKQSSLYSLTLDEVKSPLGDTGNPLGSMNLDELLQNVWTVEANKVVGIENEHVSSSSSLQCQASLTLAQALNGKTVDDVWREIQQGQKKRYGDDMKIQDREMTLGDTTLEDFLVQAGLFAEASVSPIMGFDAMDTTAPQSFQQIMGLSPCPSMSSLSETKPGRKRDAPDAYEKALERRPMRKIKNRESAARSRARKKVAYHNELVSKVTRLEQENIKLKKEKEFEQRLPPDSATEPTYQLRRISSAKF. 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00581 270 MobiDBLite consensus disorder prediction 244 270 - -
Seca7g00581 270 MobiDBLite consensus disorder prediction 1 21 - -
Seca7g00581 270 Gene3D - 197 250 - -
Seca7g00581 270 SUPERFAMILY Leucine zipper domain 199 247 IPR046347 GO:0003700|GO:0006355
Seca7g00581 270 SMART brlzneu 195 268 IPR004827 GO:0003700|GO:0006355
Seca7g00581 270 Pfam bZIP transcription factor 199 244 IPR004827 GO:0003700|GO:0006355
Seca7g00581 270 Coils Coil 223 250 - -
Seca7g00581 270 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 23 266 IPR043452 GO:0003700|GO:0045893
Seca7g00581 270 CDD bZIP_plant_BZIP46 199 254 - -
Seca7g00581 270 MobiDBLite consensus disorder prediction 171 191 - -
Seca7g00581 270 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 203 217 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00581 Seca-Chr7 6258853 6265725 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00581 22 270 bZIP Transcription Factor Family AT3G56850 44.406 9.26e-58 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca7g00581 bZIP_1 1.2e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00581 K14432 - gmx:100798549 369.777