Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00572 ATGTCAGGGCAAACACAGCGTCTGAATGTGGTCCCCACAGTGACGATGCTGGGGGTGGTGAAAGCTCGTTTGGTGGGAGCGACAAGAGGTCACGCGCTTCTGAAGAAGAAGAGTGATGCTCTCACCGTGCAGTTCAGGCAGATCCTGAAGAAGATCGTGTCCACCAAGGAATCAATGGGTGACATCATGAAAACCTCTTCTTTTGCCTTGACTGAGGCCAAGTATGTTGCTGGTGACAACATCAAGCATGTTGTGCTTGAGAATGTTAAAGAAGCTTCCCTCCGAGTCCGCTCTCGCCAGGAGAATGTTGCCGGAGTTAAGCTTCCCAAGTTTGATTACACTGCAGATGGAGAGGCCACTAAGAATGACCTCACTGGATTGGCAAGGGGTGGCCAGCAGGTGCAGCAGTGTCGTGCTGCTTACATCAAGGCAATTGAGGTTCTTGTTGAGCTTGCTTCCCTTCAAACCTCTTTCCTCACCCTTGATGAGGCCATCAAGACCACCAACCGTAGGGTCAATGCTCTTGAGAATGTGGTCAAGCCGAGGCTTGAGAACACCATTAGTTACATCAAGGGTGAGTTGGATGAGCTTGAGAGAGAGGATTTCTTTAGGTTGAAGAAGATTCAGGGATATAAGAAGAGGGAAATCGAGAGGCAGATGCAGTTGCAGGCTACCAAGGAACAGCTTGGTGACAAATTCCCCTTGCACAAAGGGGTTTCCTTCTATTCTCAAAACTTGTTGTCTGTGTCAGACAAGGATGATGATATCATTTTCTGA 777 0.4865 MSGQTQRLNVVPTVTMLGVVKARLVGATRGHALLKKKSDALTVQFRQILKKIVSTKESMGDIMKTSSFALTEAKYVAGDNIKHVVLENVKEASLRVRSRQENVAGVKLPKFDYTADGEATKNDLTGLARGGQQVQQCRAAYIKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRLENTISYIKGELDELEREDFFRLKKIQGYKKREIERQMQLQATKEQLGDKFPLHKGVSFYSQNLLSVSDKDDDIIF. 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00572 258 PANTHER V-TYPE ATP SYNTHASE SUBUNIT D 1 258 IPR002699 GO:0046961
Seca7g00572 258 Pfam ATP synthase subunit D 18 209 IPR002699 GO:0046961
Seca7g00572 258 NCBIfam V-type ATP synthase subunit D 9 213 IPR002699 GO:0046961
Seca7g00572 258 FunFam V-type proton ATPase subunit D 1 199 - -
Seca7g00572 258 Coils Coil 180 200 - -
Seca7g00572 258 Gene3D - 1 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00572 Seca-Chr7 6082568 6083344 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00572 1 258 Primary Pumps ATPases(2) AT3G58730 77.099 2.84e-145 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00572 K02149 - gmx:100808847 447.588