Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00557 ATGGCCGCTACAGTGAAGCGCGACTCTATGAGGCCCTTTATAGCAGCAGGGGGCCGCTCCGCGCCGCTACGCCGCTATAGCGCGCTATTGACTAGTCTGGCTAGGATTAAGAAAATTATGCAAGCTGATGAGGATGTAGGGAAGATTGCAATGGCTGTGCCTCTTCTAGTTTCATGTAAGAAGTTATCTCTGATTAATGATACTGTTTATGTATTGGCAGCTAAAGCACTAGAACTATTTCTGCAAGATTTGTGTGATCGAACATATGAGATAACACTTACGAGGGGAGCAAAGACCATGAATGCTTTTCATTTAAAACAGTGTGTACAGACTTTTAATGTCTTTGATTTTCTGAAAGATATTGTGAGCAAGGTTCCTGATTTAGGTGGTTCTGTTGCAACTGGTGACGATCGTTCTGTCACTAAGAGGAGGAAAGTTGCTGAAGATGACGATAATGACAGCGATGAGGAGACCAAGAGAAATAAGATGCCAGAGCCTGGACATACGAGTGGCAGAGGAAGGGGTAGGGGCAGAGGTAGGGGTCGTGGCCGTGGAAGTAGAACAGTAGTAGATCAAGAGATGACATCACATGTCAAGTTTGAAGATGATTCTGATGTATTGAAGCAAAATGACAAACACACTCAAAGCAATGAAAGCCTAGAAAATGTATCAGAACATGAAGAAGTCAAGCAGAGTTTTCCAGTTAGCAAACCAGCTGAAGTGGCCATTCGAAATTTTGACTTAAATATGGACCCAGATGAGAACATGGATTTGGTATCCCCACCAGCTCCTGTCCCAACTAGTTCATCTGCAAAATCAATATCAGAAGAGAAGCATGAGGAATACCCTGGATGGTCCTTGTCAGATGTGGAAAAATTGGCCATTGATCCCATGCAACTGGCCAGCTTAAATAGAAGGATTGATGAAGATGAGGAGGATTATGATGAAGAAATGTAG 957 0.4326 MAATVKRDSMRPFIAAGGRSAPLRRYSALLTSLARIKKIMQADEDVGKIAMAVPLLVSCKKLSLINDTVYVLAAKALELFLQDLCDRTYEITLTRGAKTMNAFHLKQCVQTFNVFDFLKDIVSKVPDLGGSVATGDDRSVTKRRKVAEDDDNDSDEETKRNKMPEPGHTSGRGRGRGRGRGRGRGSRTVVDQEMTSHVKFEDDSDVLKQNDKHTQSNESLENVSEHEEVKQSFPVSKPAEVAIRNFDLNMDPDENMDLVSPPAPVPTSSSAKSISEEKHEEYPGWSLSDVEKLAIDPMQLASLNRRIDEDEEDYDEEM. 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00557 318 MobiDBLite consensus disorder prediction 252 283 - -
Seca7g00557 318 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 65 109 IPR003958 -
Seca7g00557 318 MobiDBLite consensus disorder prediction 137 172 - -
Seca7g00557 318 MobiDBLite consensus disorder prediction 132 234 - -
Seca7g00557 318 SUPERFAMILY Histone-fold 62 126 IPR009072 GO:0046982
Seca7g00557 318 Gene3D Histone, subunit A 25 124 IPR009072 GO:0046982
Seca7g00557 318 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 33 161 - -
Seca7g00557 318 MobiDBLite consensus disorder prediction 194 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00557 Seca-Chr7 5958606 5962941 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00557 34 307 CCAAT-HAP5 Transcription Factor Family AT3G12480 41.216 8.91e-53 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00557 K21752 - gmx:100814800 400.208