Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00542 ATGGCTTCTAGAGCTATTGTTCCCCAGGAACAACCCAGAGGTGAGAATAAGCAAAAGAATGTAGCAGCAGAAGGAAGAAACAGACGCGTACTCCAGGATATTGGGAATCTTGTGGCTAAACAAGAGGCTAATGTGTCTAAGCGCATCACAAGGAACTTTTGTGCTCAATTATTGGCTAATGGCCAAGCCGTGGCAGAGAAGAACAAGAAGCTAAGCGCTGCTGAACATAGCACACTAGTTGAAGTCAATGTGGGGAATTTTATCCCTGAGACAAAGGTGGAACTAGCTCAGAAGCCCACAGAACCTGAAGTTATTATCATCAGCTCTGATGAAGAATCTGAGGAGGAAGAAGAGATTGAGAAAAAAGCTGTGAAAGGAAAAGAGACAAGAGACAGAAAAAATGCTAAGTCCTACAGCTCAGTCCTCACAGCTCGAAGCAAGGCTGCTTGTGGACTTGCTTATAAGCCAAAGGATTTGGTAGTGGACATTGATGCAACTGATGAGTACAATGAATTGGCTGCAGCAGAATACATTGATGACATCTATATGTATTACAAACTCACTGAAGAGGATGGTTGTGTACATGATTACATGGGTTCACAGCCGGATATAAATCCTAAGATGAGATCCATCCTTGTGGATTGGTTGATTGAAGTGCATCGTAAATTTGAACTCATGCCAGAGACTCTCTATCTTGCCATAAATATTGTTGACCGATTCCTGTCCATGAAGGCTGTACCTAGAAAGGAACTTCAACTGGTTGGTATCAGCTCAATGCTGATAGCATCCAAATATGAAGAAATTTGGGCACCAGAGGTTAATGACTTTGTATGCATATCAGACAATGCTTATGTTAGAGAACAGGTTCTGGTTATGGAGAAAGCAATCCTGAGAAAGCTTGAATGGTATTTAACCGTTCCCACACCCTATGTTTTCTTGGTTCGGTATATCAAAGCCTCAACTCCCTCTGATAAAGAGATGGAAAACATGGCGTTTTTCCTTGCTGAACTTGGTTTGATGCACTATCCTGTTGTGTCCTTGTATTGTCCTTCTGTGATTGCTGCTTCTGCTGTATATGCAGCAAGATGTACCCTTGAAAGGAGTCCTTTCTGGACAGAGACTCTGAAGCACTACACAGGCTATTCTGAGGAAAAACTAAGGTAA 1164 0.4227 MASRAIVPQEQPRGENKQKNVAAEGRNRRVLQDIGNLVAKQEANVSKRITRNFCAQLLANGQAVAEKNKKLSAAEHSTLVEVNVGNFIPETKVELAQKPTEPEVIIISSDEESEEEEEIEKKAVKGKETRDRKNAKSYSSVLTARSKAACGLAYKPKDLVVDIDATDEYNELAAAEYIDDIYMYYKLTEEDGCVHDYMGSQPDINPKMRSILVDWLIEVHRKFELMPETLYLAINIVDRFLSMKAVPRKELQLVGISSMLIASKYEEIWAPEVNDFVCISDNAYVREQVLVMEKAILRKLEWYLTVPTPYVFLVRYIKASTPSDKEMENMAFFLAELGLMHYPVVSLYCPSVIAASAVYAARCTLERSPFWTETLKHYTGYSEEKLR. 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00542 387 SUPERFAMILY Cyclin-like 308 386 IPR036915 -
Seca7g00542 387 MobiDBLite consensus disorder prediction 109 130 - -
Seca7g00542 387 FunFam G2/mitotic-specific cyclin 193 305 - -
Seca7g00542 387 ProSitePatterns Cyclins signature. 209 240 IPR006671 -
Seca7g00542 387 PANTHER CYCLINS 125 366 IPR039361 -
Seca7g00542 387 Gene3D - 180 386 - -
Seca7g00542 387 SMART Cyclin_C_2 307 387 IPR004367 -
Seca7g00542 387 MobiDBLite consensus disorder prediction 1 24 - -
Seca7g00542 387 Pfam Cyclin, C-terminal domain 307 387 IPR004367 -
Seca7g00542 387 Gene3D - 194 305 - -
Seca7g00542 387 SUPERFAMILY Cyclin-like 171 304 IPR036915 -
Seca7g00542 387 CDD CYCLIN_AtCycB-like_rpt1 157 302 - -
Seca7g00542 387 SMART cyclin_7 214 298 IPR013763 -
Seca7g00542 387 SMART cyclin_7 311 387 IPR013763 -
Seca7g00542 387 Pfam Cyclin, N-terminal domain 180 304 IPR006671 -
Seca7g00542 387 PIRSF Cyclin_A_B_D_E 2 387 IPR046965 GO:0016538|GO:0044772
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00542 Seca-Chr7 5762984 5765683 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00542 14 386 Core Cell Cycle Gene Families AT2G26760 54.667 2.45e-140 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00542 K21777 - gmx:547782 541.191