Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00538 ATGGAACAGAGAAGAAGAAGAAGCTCTTCATCATGTCTTCTCTTCTCAACTCTCCCTTGTCTCCTTCTTCTCTTCTGTTTCTCTGGATCAGTTGAGGCTTACAAGAATTACACAGTGGGAGATTCTTTAGGCTGGTTTGACAATACCATGAAGCCTAATGTCAATTATCAGAAGTGGGTTGCCAATAAAGAGTTCACCTTGGGTGATTTCCTCATTTTCAACACAGACACTAACCACTCTGTTGTTCAGACATACAATTTCACCACATACAAACTATGTGACTATGATGATGCACTAGACAATGACACAATCCAATGGTCAGCATCTGATCCTTCCAATACTGAGACACACCCTGTGACAGTAGCAGTTCCTTTGGTAAAGGAAGGAATGACATACTTTTTCTCAAGTGATTATGATGGTGACCAATGCAAGAGTGGCCAACATTTCAAAATAAATGTGACTCATGGACAAGGGTTGCCAAAGAGTCTTCAAAATCCCACCACAGAAGATTCTCCATCTCCTACTAGTCCAGTTGCTGGAGATGATGAATCAGCACCAGACACAATTGTTCCTTCCAATTTCAGCCATCCCCGGGAAGAAAGTGATGATGATGAGAAAGATAGTGACAAAGGAAAACAGAAATCTAGTTCTGTTTCAATGTCAATGTATGCACAACTTCACAACAAAGTGTGTGGGTCTCTTATCTTGTTAGGATTAGTTTTCTTGTTTTAG 732 0.4044 MEQRRRRSSSSCLLFSTLPCLLLLFCFSGSVEAYKNYTVGDSLGWFDNTMKPNVNYQKWVANKEFTLGDFLIFNTDTNHSVVQTYNFTTYKLCDYDDALDNDTIQWSASDPSNTETHPVTVAVPLVKEGMTYFFSSDYDGDQCKSGQHFKINVTHGQGLPKSLQNPTTEDSPSPTSPVAGDDESAPDTIVPSNFSHPREESDDDEKDSDKGKQKSSSVSMSMYAQLHNKVCGSLILLGLVFLF. 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00538 243 MobiDBLite consensus disorder prediction 156 218 - -
Seca7g00538 243 SUPERFAMILY Cupredoxins 35 153 IPR008972 -
Seca7g00538 243 ProSiteProfiles Phytocyanin domain profile. 35 155 IPR003245 GO:0009055
Seca7g00538 243 FunFam Early nodulin-like protein 18 34 156 - -
Seca7g00538 243 MobiDBLite consensus disorder prediction 156 178 - -
Seca7g00538 243 MobiDBLite consensus disorder prediction 196 213 - -
Seca7g00538 243 Pfam Plastocyanin-like domain 48 147 IPR003245 GO:0009055
Seca7g00538 243 PANTHER BLUE COPPER PROTEIN 34 191 IPR039391 GO:0009055
Seca7g00538 243 CDD Phytocyanin 35 153 - -
Seca7g00538 243 Gene3D - 34 158 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00538 Seca-Chr7 5739866 5742569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00538 8 207 Phytocyanin Superfamily AT1G08500 61.386 2.00e-82 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00538 - - ccaj:109789262 352.829