Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00528 ATGTGCCTTCATACCAAGGAAACCGACAACGAACTACCAATAACTGTTGAAACATTTTTTATTCGAAGAATTTCGTTGGATGATATTGGATTGCATTATGTTTGTGGTATAGCAGAACGCCTTTGTGCAGTAGGTCGAATTTTGGGGACCATGATAGTAATCCTTGTTGAGAAACTTTCAACTCGTCTATTCCGAGATATAATCCAATCATTGGATGGCAAGATAAAGCCTATGCCCCAAAATGAAATTCATAAATGA 258 0.3721 MCLHTKETDNELPITVETFFIRRISLDDIGLHYVCGIAERLCAVGRILGTMIVILVEKLSTRLFRDIIQSLDGKIKPMPQNEIHK. 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00528 85 Gene3D - 1 71 IPR011989 -
Seca7g00528 85 Pfam Cell differentiation family, Rcd1-like 1 70 - -
Seca7g00528 85 PANTHER UNCHARACTERIZED 1 69 IPR007216 GO:0006402|GO:0030014
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00528 Seca-Chr7 5637721 5637978 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Seca7g00528 Rcd1 6.2e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00528 K12606 - psom:113287994 78.5666