Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00517 ATGCCTCCCAAAGCAACAGCTTCCTATAGCACTGGGGGTAGTGCTGAAGGTGGTCGGGGAAGGGAAATATTGGTGCAGCATTTGTTGGTGAAAGAAGATGACCAGAAGCTACTGTTGGATCTTCTGCAGAGAATCTCTGCAGGTGAAGATTTGAGTGATCTTGCTGTGGAACATTCAATTTGCCCATCTAAAGAAGATGGAGGAATGCTTGGGTGGGTGAAAAAGGGACAAATGGTTCCTGAATTTGAGGAGGCTGCATTTACTGCACCTTTAAACAAAGTTGTAAGGTGCAAAACACAATTTGGTTGGCACCTGCTGCAGGTTTTATCTGAAAGGGAAGAATCATTACTTCAAGACATTCAACCTGATGAGCTGCATGTCAAAATTCAAGATCCCAACTTTTTGGACGAGGCGCAGTTAATTGATGTTCGAGAGCCTGAAGAAGTGGCCAAAGCATCTTTGCCAGGATTTACGGTTCTTCCCCTCAGACAATTTGGAAGCTGGGGGCCTGAAATAACTTCCAAATTTGACCCTCAAAAGGATACATATGTTATGTGTCATCATGGTGTGCGGTCATTACAGGTGGCCAAGTGGTTACAATCACAGGGTTTTAGGAAAGTATACAATCTTTCTGGGGGAATCCATGCCTATGCTGTCCAGGTTGATCCATCAGTCCCCACTTACTGA 687 0.4469 MPPKATASYSTGGSAEGGRGREILVQHLLVKEDDQKLLLDLLQRISAGEDLSDLAVEHSICPSKEDGGMLGWVKKGQMVPEFEEAAFTAPLNKVVRCKTQFGWHLLQVLSEREESLLQDIQPDELHVKIQDPNFLDEAQLIDVREPEEVAKASLPGFTVLPLRQFGSWGPEITSKFDPQKDTYVMCHHGVRSLQVAKWLQSQGFRKVYNLSGGIHAYAVQVDPSVPTY. 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00517 228 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 117 226 IPR036873 -
Seca7g00517 228 Pfam PPIC-type PPIASE domain 31 110 - -
Seca7g00517 228 Gene3D - 19 112 IPR046357 GO:0003755
Seca7g00517 228 Gene3D - 113 225 IPR036873 -
Seca7g00517 228 ProSiteProfiles PpiC-type peptidyl-prolyl cis-trans isomerase family profile. 20 110 IPR000297 GO:0003755
Seca7g00517 228 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 228 - -
Seca7g00517 228 Pfam Rhodanese-like domain 126 218 IPR001763 -
Seca7g00517 228 SMART rhod_4 120 223 IPR001763 -
Seca7g00517 228 ProSiteProfiles Rhodanese domain profile. 134 226 IPR001763 -
Seca7g00517 228 SUPERFAMILY FKBP-like 20 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00517 Seca-Chr7 5562487 5566540 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00517 21 228 Sulfurtransferasese or Rhodanese AT5G19370 69.231 1.55e-106 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00517 - - aprc:113846694 421.779