Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00514 ATGGATACAAACTTGACTCTAAAAGTTGGTCTTGAATTAGATAATTTAGAATATGCATGGAAATTTTGGGTAAATTACGGAGGCATAAAAGGCTTTGGAGTTAGAAAACAATATCCAAGCAAGAGTAAGAAAGATGGTTCCATTACGTCTTACTTATATGTTTGTTGTAAGGAGGGTGTACGGAAACCAGACCCAAGGGATTATAAAACGACCAATCCAAAACCTGAGACAAGAACGGGGGTGTATGGCAAAAATGAAAGTCAAACGATTCAATGA 276 0.3659 MDTNLTLKVGLELDNLEYAWKFWVNYGGIKGFGVRKQYPSKSKKDGSITSYLYVCCKEGVRKPDPRDYKTTNPKPETRTGVYGKNESQTIQ. 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00514 91 MobiDBLite consensus disorder prediction 60 91 - -
Seca7g00514 91 Pfam FAR1 DNA-binding domain 21 80 IPR004330 -
Seca7g00514 91 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 8 80 - -
Seca7g00514 91 MobiDBLite consensus disorder prediction 74 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00514 Seca-Chr7 5533876 5534151 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca7g00514 FAR1 2.8e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00514 - - vun:114184605 140.584