Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00509 ATGGAGAATTTGACCAAAACCTCCATCTCCAAGATACCAATTGGGAGGTCACTTAGCTCCGAGAATAATTCCAAGCCACCCATCCCCATCAAACCAGACAACAACCAACTCTTAAAACAAATCAATATTGAAATTCCTGCAGGGCACGATGTTATCGATGTCCTCACCAGGTACGCTCATCGCCATCGTGTCGGCATCTCGGTGTTGAGTGTGGTTGGTTATGTATCTGATGTTACCCTTCACCACCCTTTATGTCGTCTCCAAGGACACTTCAATCTGGTCTCTCTCACCGGTACTTACATGAATGGTCATTTTCAACCTTCTACTTCCATCCCTCCTTTGTCCAATTTTTCAATTCAACTATCTGATTATCCAGGCCGATTGTTCGGTGGGGTTGTTGGAGGGAAGGTTGTGGCCGCAGGTCTTGTGATGGTCAAGGCATTAATGTTTAAGAAAATCGAGTACCACAACGCGTTCTTAATCAATGGAAGTGTTGAAGTTGAAGACGGTGAGGTTAGTGTTGATGTAGGTGAACCCAACAACATCACCAACACCAATACTACCATTTCCATGCCCAATAATATGTCAGCTTTTGGTGTTGGCACCAATTCAATCTAG 618 0.4434 MENLTKTSISKIPIGRSLSSENNSKPPIPIKPDNNQLLKQINIEIPAGHDVIDVLTRYAHRHRVGISVLSVVGYVSDVTLHHPLCRLQGHFNLVSLTGTYMNGHFQPSTSIPPLSNFSIQLSDYPGRLFGGVVGGKVVAAGLVMVKALMFKKIEYHNAFLINGSVEVEDGEVSVDVGEPNNITNTNTTISMPNNMSAFGVGTNSI. 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00509 205 Pfam Plants and Prokaryotes Conserved (PCC) domain 42 150 IPR005175 -
Seca7g00509 205 SUPERFAMILY AF0104/ALDC/Ptd012-like 39 156 - -
Seca7g00509 205 ProSiteProfiles PPC domain profile profile. 34 171 IPR005175 -
Seca7g00509 205 CDD DUF296 43 129 IPR005175 -
Seca7g00509 205 Gene3D - 38 168 - -
Seca7g00509 205 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 12 171 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00509 Seca-Chr7 5483305 5483922 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00509 11 157 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 33.974 2.74e-23 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00509 - - aprc:113857474 110.153