Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00508 ATGGAAGAAAATAGACGCGCACCCTTTCTCTCCCTAACCTCAAACACTGACAACTCGGGGTACATGATTTCCCTTTCCAATGAGAACAATTGCGAGCTAGTTCCCCCACCACCACCACCTCTACCGTCCTTTGATGTAGAGCATGAAATCAAGGAGATGGAGAAGTTGACCAACACCTCCATCTCCAAGAGACCAATTGGGAGGCCACTTAGCTCCAAGAATAATTCCAAGCCACCCATCCCCATCAAACAAGACACCGACCAAATCTTCAAACAAATCATTATTGAAATTCCTGCAGGACACAATGTTATCGATGTCCTCACCGGGTACGCTTATCGCCATCGTGTCGGCATCTCGGTGTTGAGTGTGGTTGGTTATGTATCTGATGTTACCCTTCACCACCCTTTATGTCGTCTCCAAGGACACTTTAATATGGTCTCTCTCACTGGTACTTACATGAGTGATCATTTTCCACCTTCTACTTCCATCCCTCCTTTGTCCAATTTTTCGATTCAACTATTTGATTATCCAGGCCGATTGTTCGGTGGATTTGTTGGAGGGAAGGTTGTGGCTGCAGGTCTTGTGATGGTCAAGGTATTAATGTTCAAGAAAATCGAGTACCACAACGCGTTCTTAATCAATGGAAGCGTTGAAGTTGAAGACGATGAGCTTAGTGTTGATGTAGGTGAACCTAGCAATATCACCAACACCAATTAA 717 0.4477 MEENRRAPFLSLTSNTDNSGYMISLSNENNCELVPPPPPPLPSFDVEHEIKEMEKLTNTSISKRPIGRPLSSKNNSKPPIPIKQDTDQIFKQIIIEIPAGHNVIDVLTGYAYRHRVGISVLSVVGYVSDVTLHHPLCRLQGHFNMVSLTGTYMSDHFPPSTSIPPLSNFSIQLFDYPGRLFGGFVGGKVVAAGLVMVKVLMFKKIEYHNAFLINGSVEVEDDELSVDVGEPSNITNTN. 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00508 238 Gene3D - 90 219 - -
Seca7g00508 238 MobiDBLite consensus disorder prediction 61 82 - -
Seca7g00508 238 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 52 212 IPR014476 GO:0003680
Seca7g00508 238 SUPERFAMILY AF0104/ALDC/Ptd012-like 89 208 - -
Seca7g00508 238 Pfam Plants and Prokaryotes Conserved (PCC) domain 92 202 IPR005175 -
Seca7g00508 238 CDD DUF296 93 197 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00508 Seca-Chr7 5472552 5473268 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00508 61 209 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 36.076 2.84e-27 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00508 - - aprc:113857474 107.842