Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00507 ATGGAGGAAAATAGATGCGCACAGTTTTTCACCCTAACCTCAAACACTGACAGCTCGAGGTACATAATTTCCCTTTCCAACAAGAATAATTTCAAGCTAGTTCCACCGTCGCCACCACCGTCCTCTAATGTAGGGCATGAAATCAAGGAGATGGAGAATTTGACCAAGACCTCCATCTCCAAAAGACCAATTGGGAGGCCACTTAGCTCCAAGAATAAGCCCAAGCCACTCGTCCTCAACAAACAAGACAACGCCCAACTCTTTAAACAAATCATCATTGAAATTCCTGCGGGACACGATGTTATCGATGTCCTCACCGGGTTCGCTCATCACCTTAGTGTCGGCATCTCGGTGTTGAGTGTGGTGGGTTATGTATCTGATGTTACCCTTCACAACCCTTTATGTTGTATCCAAGGACACTTCAACATGGTCTCTCTCACCGGTACTTACTTGAGTAGTCATTTTCGACCTTCTGCTTCCACCCATGCTTTGCCTAATGTTGCAATTCAACTATCAGATTATCAGGGCCGATTGTTCGGTGGGGTTGTTGGAGGGAAGGTTGTGGCTGCGGGTCTTGTGGTGGTCAAGGCATTAATGTTCAAGAAAATTGAGTACCACAACGCGTTCTTAATCAATGGAAGCATTAAAGTTGAAGACAATGAGCTTAATGTTGATGCATCTGAACCCAGCGAAATCACCAACACCAATACTACCATTTCCATGCCTAATAATATGTCAGCTTTTGGTGTTGACACCAATTCAATCTAG 768 0.4453 MEENRCAQFFTLTSNTDSSRYIISLSNKNNFKLVPPSPPPSSNVGHEIKEMENLTKTSISKRPIGRPLSSKNKPKPLVLNKQDNAQLFKQIIIEIPAGHDVIDVLTGFAHHLSVGISVLSVVGYVSDVTLHNPLCCIQGHFNMVSLTGTYLSSHFRPSASTHALPNVAIQLSDYQGRLFGGVVGGKVVAAGLVVVKALMFKKIEYHNAFLINGSIKVEDNELNVDASEPSEITNTNTTISMPNNMSAFGVDTNSI. 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00507 255 Pfam Plants and Prokaryotes Conserved (PCC) domain 90 200 IPR005175 -
Seca7g00507 255 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 51 211 IPR014476 GO:0003680
Seca7g00507 255 Gene3D - 88 221 - -
Seca7g00507 255 SUPERFAMILY AF0104/ALDC/Ptd012-like 86 206 - -
Seca7g00507 255 CDD DUF296 91 179 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00507 Seca-Chr7 5442010 5442777 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00507 59 207 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 35.256 2.99e-25 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00507 - - lang:109328424 120.168