Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00506 ATGGAGAATTTGACCACAACCTCCATCTCGAAGAGCCCAATTGGGAGGCCACTTAGCTCCAAGAATAAGCCCAAGCCACTCGTCCTCATCAAACAAGACAATGCCCAACTCTTTAAACAAATCATCATTGAAATTCCTGCAGGACACGATGTTATCGATGTCCTTACCGGGTACCCTCATCACCTTAGTGTCAGCATCTCAGTGTTGAGTGTCATGGGTTATGTATGTGATGTGACCCTTTACAACCCTTTATGTCGTATCCAAGGACACTTCAACATGGACTCTCTCACCGATTATCAGGGCCGATTGTTCGGTGGGGTTGTTGGAGGGAAGGTTGTGGCTGCGAGTCTTGTGGTGGTCAAGGCATTAATATTTAAGAAATTTGAGTACCACAACGTGTTCTTAATCAATGGAAGCGTTGAAGTTGAAGATGACGAGCTTAATGTTGATGCATTTGAACCCAGCGAAATCACCAACACCGATACTACCATTTCCATGCCCAATAATATGTCAAATTTTGGTGTTGGCACCAATTCAATCTAG 543 0.442 MENLTTTSISKSPIGRPLSSKNKPKPLVLIKQDNAQLFKQIIIEIPAGHDVIDVLTGYPHHLSVSISVLSVMGYVCDVTLYNPLCRIQGHFNMDSLTDYQGRLFGGVVGGKVVAASLVVVKALIFKKFEYHNVFLINGSVEVEDDELNVDAFEPSEITNTDTTISMPNNMSNFGVGTNSI. 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00506 180 SUPERFAMILY AF0104/ALDC/Ptd012-like 36 132 - -
Seca7g00506 180 MobiDBLite consensus disorder prediction 1 20 - -
Seca7g00506 180 MobiDBLite consensus disorder prediction 1 17 - -
Seca7g00506 180 Pfam Plants and Prokaryotes Conserved (PCC) domain 40 125 IPR005175 -
Seca7g00506 180 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 10 97 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00506 Seca-Chr7 5436878 5437495 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00506 11 133 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 30.323 1.93e-16 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00506 - - lang:109328424 92.4337