Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00470 ATGTCTCTTAGAAATCAAGCTTCTATCTTGGTTTCTATAAAACAAGATTTTGAAGCTAACACTTCTTTGAAAAGCTGGGACATGTCAAATTACATGTTTCTTTGCACTTGGGATGGTATTCAGTGTGACCAAAAGAATAGGTCTGTGGTGTCACTAGATATCTCCAACTTGAATGTTTCTGGGACACTTTCACCTTCCATCACAGGACTCAAGAACCTTGTTAGTGTCTCAGTTGCAGGGAATGGCTTTTCTGGAGAGTTCCCAGCTGATATTCACAAGCTACAAATGTTGAGATTCCTCAACATATCCAACAACATGTTCAGTGGGAATATGAGTTGGGAATTCTCAGAGTTGAAAGAGCTTCAAGTTCTTGATGCTTATAACAATGAGTTCAATTGCTCACTCCCCCTTGGTGTCAGTGATGTACCTAAGCTCAAGTACTTGAATTTTGGCGGGAATTATTTCTCTGGTGAAATCCCTCCAAGATATGGAAACATGGTGCAGCTTAACTTTTTGTCTCTTGCAGGAAATGATTTGAGAGGTTTCATACCCTCTGAGCTTGGAAATCTCACCAACTTGACCCAACTTTTCTTGGGATATTACAACCAATTTGATGGTGGAATCCCTCCTGATTTTGGTAAGCTGGTGAATTTAGTTCATCTTGACCTTGCAAACTGTGGTTTGAAGGGTCCAATTCCAGCTGAGTTGGGGAACCTCAACAAACTAGACACACTCTTCTTGCAAACTAATCAGCTCAGTGGTTCAATCCCTTCTCAACTAGGCAATCTCAGCAGCTTGAAATCTCTTGATATATCAAACAATGAGCTAATAGGAGACATTCCAAATGAGTTCTCAGGCCTTCATGAGCTTATCCTCTTGAACTTATTCATTAACAGGTTGCATGGAGAAATTCCCACTTTCATTGCTGAGCTACCTAAGTTGGAAGTGTTGAAGCTTTGGCATAACAACTTCACAGGAGCTATTCCTTCAAAGCTTGGCCAGAATGGTAAATTGACTGAGCTTGACTTGTCAACAAATAAGCTCACTGGATTAGTGCCAAAATCTCTATGCCTTGGAAAGAGGCTAAAGATTTTGATCTTGCTCAATAACTTTCTCTTTGGATCTTTGCCTGATGAACTTGGTCAATGCTACACACTCCAAAGAGTTCGTTTGGGGCAGAACTATTTGACAGGGTCAATACCAAATGGATTTCTTTATTTGCCTGAGCTTTCCCTTCTGGAACTACAGAACAATTATCTTAGTGGCTGGCTTCCACATGAAACAAGCACTGTACCCTCTAAACTTGGACAGTTGAATCTAGCAAATAATCGATTATCAGGCTCTCTGCCAACCACTATTGGAAACTTTCCCAACTTGCAAATTCTGCTGCTTTATGGAAATAGATTCTCAGGAGACATCCCTCCAGATATTGGGAGGTTGAAAAGCATTCTCAAGTTGGATATGAGTGTTAACAATTTTTCAGGCAGTATTCCTCCTGAGATAGGTAATTGTTCTTTCCTCACCTATTTAGATTTGAGCCAGAACCAATTATCAGGTCCTATCCCAGTTCAGGTTTCTCAAATTCACATACTAAACTATCTTAATGTCTCATGGAACAACCTAAACCAAAGTCTTCCCAAGGAACTTGGGGCCATAAAGGGCTTAACTTCAGCAGATTTCTCTCATAATAACTTCTCTGGTTCAATTCCTGAGGTGGGACAATTCTCAGTCTTTAATTCTACATCTTTTGTGGGAAATCCTCAGCTCTGTGGATATGACTTGAATCCATGCAACCATTCTTCAACAACAATATTGGAGTCTCAGGACACAGGAAATTCAAAACCTGGAGTTCTTGTGTTAGCTTGCTCATTGGTGTTTACAATCTTTGCCATTGTCAAGAGCAGAAAGGGAAGGAGGCACTCCAATTCATGGAAGCTCACAGCATTTCAGAAGCTGGCATATGGAAGTGAAGACATTGTAGGATGTATAAAGGAAAGCAATATCATAGGAAGGGGAGGAGCTGGGGTTGTTTATGGAGGAACAATGCCAAATGGAGAGCAAGTAGCTGTGAAGAAGCTGTTGGGAATAAACAAAGGTTGTTCTCATGATAATGGCTTCTCTGCAGAAATAAGGACACTAGGTAGGATCAGGCACAGGTACATTGTAAGGTTGCTAGCATTTTGCACAAATAGAGAGACCAATTTACTTGTTTATGAGTACATGCCAAATGGAAGCTTGGGTGAAGTCTTGCATGGGAAAAGGGGAGAGTTTCTTCAGTGGGATACTAGGCTGAAAATAGCAACAGAAGCTGCAAAAGGACTTTGCTATTTGCACCATGATTGTTCCCCTCTGATAATCCATAGAGATGTTAAGTCAAACAACATATTATTGAACTCTGAATTTGAGGCTCATGTTGCTGATTTTGGGCTTGCCAAGTTCTTGCAAGATACAGGCACGTCAGAGTGCATGTCATCCATTGCTGGTTCTTATGGCTATATAGCTCCAGAGTATGCATACACATTGAGAGTTGATGAGAAAAGTGATGTTTATAGCTTTGGAGTGGTGCTGCTAGAACTATTAACAGGGAGAAGGCCAGTGGGGGATTTTGGGGAAGAAGGGATAGATATTGTTCAATGGACAAAGCTGCAAACAAATTGGAGCAAAGAGAAAGTAGTGAAGATTCTTGATGGGAGGCTAAGTCACATTCCTTTAGATGAAGCAGAACAGTTATTCTTTGTGGCTATGTTATGTGTTCAGGAACAAAGTGTGGAGAGACCAACCATGAGGGAAGTGGTTGAAATGCTGGCACAAGCAAAACAACCAAATACATTTCAAGTGAAGTAA 2844 0.4075 MSLRNQASILVSIKQDFEANTSLKSWDMSNYMFLCTWDGIQCDQKNRSVVSLDISNLNVSGTLSPSITGLKNLVSVSVAGNGFSGEFPADIHKLQMLRFLNISNNMFSGNMSWEFSELKELQVLDAYNNEFNCSLPLGVSDVPKLKYLNFGGNYFSGEIPPRYGNMVQLNFLSLAGNDLRGFIPSELGNLTNLTQLFLGYYNQFDGGIPPDFGKLVNLVHLDLANCGLKGPIPAELGNLNKLDTLFLQTNQLSGSIPSQLGNLSSLKSLDISNNELIGDIPNEFSGLHELILLNLFINRLHGEIPTFIAELPKLEVLKLWHNNFTGAIPSKLGQNGKLTELDLSTNKLTGLVPKSLCLGKRLKILILLNNFLFGSLPDELGQCYTLQRVRLGQNYLTGSIPNGFLYLPELSLLELQNNYLSGWLPHETSTVPSKLGQLNLANNRLSGSLPTTIGNFPNLQILLLYGNRFSGDIPPDIGRLKSILKLDMSVNNFSGSIPPEIGNCSFLTYLDLSQNQLSGPIPVQVSQIHILNYLNVSWNNLNQSLPKELGAIKGLTSADFSHNNFSGSIPEVGQFSVFNSTSFVGNPQLCGYDLNPCNHSSTTILESQDTGNSKPGVLVLACSLVFTIFAIVKSRKGRRHSNSWKLTAFQKLAYGSEDIVGCIKESNIIGRGGAGVVYGGTMPNGEQVAVKKLLGINKGCSHDNGFSAEIRTLGRIRHRYIVRLLAFCTNRETNLLVYEYMPNGSLGEVLHGKRGEFLQWDTRLKIATEAAKGLCYLHHDCSPLIIHRDVKSNNILLNSEFEAHVADFGLAKFLQDTGTSECMSSIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGEEGIDIVQWTKLQTNWSKEKVVKILDGRLSHIPLDEAEQLFFVAMLCVQEQSVERPTMREVVEMLAQAKQPNTFQVK. 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00470 947 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 168 937 - -
Seca7g00470 947 Gene3D Ribonuclease Inhibitor 3 160 IPR032675 -
Seca7g00470 947 Gene3D Phosphorylase Kinase; domain 1 641 740 - -
Seca7g00470 947 ProSiteProfiles Protein kinase domain profile. 663 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g00470 947 Gene3D Ribonuclease Inhibitor 259 336 IPR032675 -
Seca7g00470 947 Gene3D Transferase(Phosphotransferase) domain 1 741 946 - -
Seca7g00470 947 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 5 114 - -
Seca7g00470 947 Gene3D Ribonuclease Inhibitor 337 601 IPR032675 -
Seca7g00470 947 SUPERFAMILY RNI-like 51 396 - -
Seca7g00470 947 SUPERFAMILY Protein kinase-like (PK-like) 657 935 IPR011009 -
Seca7g00470 947 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 203 308 - -
Seca7g00470 947 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 315 601 - -
Seca7g00470 947 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 741 947 - -
Seca7g00470 947 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 115 202 - -
Seca7g00470 947 SMART LRR_typ_2 407 438 IPR003591 -
Seca7g00470 947 SMART LRR_typ_2 166 190 IPR003591 -
Seca7g00470 947 SMART LRR_typ_2 336 358 IPR003591 -
Seca7g00470 947 SMART LRR_typ_2 215 239 IPR003591 -
Seca7g00470 947 SMART LRR_typ_2 263 286 IPR003591 -
Seca7g00470 947 SMART LRR_typ_2 311 335 IPR003591 -
Seca7g00470 947 SMART LRR_typ_2 456 480 IPR003591 -
Seca7g00470 947 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 632 740 - -
Seca7g00470 947 Gene3D Ribonuclease Inhibitor 161 258 IPR032675 -
Seca7g00470 947 Pfam Leucine rich repeat N-terminal domain 5 43 IPR013210 -
Seca7g00470 947 ProSiteProfiles Leucine-rich repeat profile. 337 358 IPR001611 GO:0005515
Seca7g00470 947 ProSitePatterns Serine/Threonine protein kinases active-site signature. 785 797 IPR008271 GO:0004672|GO:0006468
Seca7g00470 947 SUPERFAMILY L domain-like 338 597 - -
Seca7g00470 947 SMART serkin_6 663 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g00470 947 Pfam Leucine Rich Repeat 265 287 IPR001611 GO:0005515
Seca7g00470 947 Pfam Protein tyrosine and serine/threonine kinase 665 935 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00470 Seca-Chr7 4903876 4907912 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00470 18 937 Receptor kinase-like Gene Family AT5G65700 58.387 0.0 1096
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Seca7g00470 PK_Tyr_Ser-Thr 2.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00470 - - gmx:100816158 1647.87