Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca7g00470 | ATGTCTCTTAGAAATCAAGCTTCTATCTTGGTTTCTATAAAACAAGATTTTGAAGCTAACACTTCTTTGAAAAGCTGGGACATGTCAAATTACATGTTTCTTTGCACTTGGGATGGTATTCAGTGTGACCAAAAGAATAGGTCTGTGGTGTCACTAGATATCTCCAACTTGAATGTTTCTGGGACACTTTCACCTTCCATCACAGGACTCAAGAACCTTGTTAGTGTCTCAGTTGCAGGGAATGGCTTTTCTGGAGAGTTCCCAGCTGATATTCACAAGCTACAAATGTTGAGATTCCTCAACATATCCAACAACATGTTCAGTGGGAATATGAGTTGGGAATTCTCAGAGTTGAAAGAGCTTCAAGTTCTTGATGCTTATAACAATGAGTTCAATTGCTCACTCCCCCTTGGTGTCAGTGATGTACCTAAGCTCAAGTACTTGAATTTTGGCGGGAATTATTTCTCTGGTGAAATCCCTCCAAGATATGGAAACATGGTGCAGCTTAACTTTTTGTCTCTTGCAGGAAATGATTTGAGAGGTTTCATACCCTCTGAGCTTGGAAATCTCACCAACTTGACCCAACTTTTCTTGGGATATTACAACCAATTTGATGGTGGAATCCCTCCTGATTTTGGTAAGCTGGTGAATTTAGTTCATCTTGACCTTGCAAACTGTGGTTTGAAGGGTCCAATTCCAGCTGAGTTGGGGAACCTCAACAAACTAGACACACTCTTCTTGCAAACTAATCAGCTCAGTGGTTCAATCCCTTCTCAACTAGGCAATCTCAGCAGCTTGAAATCTCTTGATATATCAAACAATGAGCTAATAGGAGACATTCCAAATGAGTTCTCAGGCCTTCATGAGCTTATCCTCTTGAACTTATTCATTAACAGGTTGCATGGAGAAATTCCCACTTTCATTGCTGAGCTACCTAAGTTGGAAGTGTTGAAGCTTTGGCATAACAACTTCACAGGAGCTATTCCTTCAAAGCTTGGCCAGAATGGTAAATTGACTGAGCTTGACTTGTCAACAAATAAGCTCACTGGATTAGTGCCAAAATCTCTATGCCTTGGAAAGAGGCTAAAGATTTTGATCTTGCTCAATAACTTTCTCTTTGGATCTTTGCCTGATGAACTTGGTCAATGCTACACACTCCAAAGAGTTCGTTTGGGGCAGAACTATTTGACAGGGTCAATACCAAATGGATTTCTTTATTTGCCTGAGCTTTCCCTTCTGGAACTACAGAACAATTATCTTAGTGGCTGGCTTCCACATGAAACAAGCACTGTACCCTCTAAACTTGGACAGTTGAATCTAGCAAATAATCGATTATCAGGCTCTCTGCCAACCACTATTGGAAACTTTCCCAACTTGCAAATTCTGCTGCTTTATGGAAATAGATTCTCAGGAGACATCCCTCCAGATATTGGGAGGTTGAAAAGCATTCTCAAGTTGGATATGAGTGTTAACAATTTTTCAGGCAGTATTCCTCCTGAGATAGGTAATTGTTCTTTCCTCACCTATTTAGATTTGAGCCAGAACCAATTATCAGGTCCTATCCCAGTTCAGGTTTCTCAAATTCACATACTAAACTATCTTAATGTCTCATGGAACAACCTAAACCAAAGTCTTCCCAAGGAACTTGGGGCCATAAAGGGCTTAACTTCAGCAGATTTCTCTCATAATAACTTCTCTGGTTCAATTCCTGAGGTGGGACAATTCTCAGTCTTTAATTCTACATCTTTTGTGGGAAATCCTCAGCTCTGTGGATATGACTTGAATCCATGCAACCATTCTTCAACAACAATATTGGAGTCTCAGGACACAGGAAATTCAAAACCTGGAGTTCTTGTGTTAGCTTGCTCATTGGTGTTTACAATCTTTGCCATTGTCAAGAGCAGAAAGGGAAGGAGGCACTCCAATTCATGGAAGCTCACAGCATTTCAGAAGCTGGCATATGGAAGTGAAGACATTGTAGGATGTATAAAGGAAAGCAATATCATAGGAAGGGGAGGAGCTGGGGTTGTTTATGGAGGAACAATGCCAAATGGAGAGCAAGTAGCTGTGAAGAAGCTGTTGGGAATAAACAAAGGTTGTTCTCATGATAATGGCTTCTCTGCAGAAATAAGGACACTAGGTAGGATCAGGCACAGGTACATTGTAAGGTTGCTAGCATTTTGCACAAATAGAGAGACCAATTTACTTGTTTATGAGTACATGCCAAATGGAAGCTTGGGTGAAGTCTTGCATGGGAAAAGGGGAGAGTTTCTTCAGTGGGATACTAGGCTGAAAATAGCAACAGAAGCTGCAAAAGGACTTTGCTATTTGCACCATGATTGTTCCCCTCTGATAATCCATAGAGATGTTAAGTCAAACAACATATTATTGAACTCTGAATTTGAGGCTCATGTTGCTGATTTTGGGCTTGCCAAGTTCTTGCAAGATACAGGCACGTCAGAGTGCATGTCATCCATTGCTGGTTCTTATGGCTATATAGCTCCAGAGTATGCATACACATTGAGAGTTGATGAGAAAAGTGATGTTTATAGCTTTGGAGTGGTGCTGCTAGAACTATTAACAGGGAGAAGGCCAGTGGGGGATTTTGGGGAAGAAGGGATAGATATTGTTCAATGGACAAAGCTGCAAACAAATTGGAGCAAAGAGAAAGTAGTGAAGATTCTTGATGGGAGGCTAAGTCACATTCCTTTAGATGAAGCAGAACAGTTATTCTTTGTGGCTATGTTATGTGTTCAGGAACAAAGTGTGGAGAGACCAACCATGAGGGAAGTGGTTGAAATGCTGGCACAAGCAAAACAACCAAATACATTTCAAGTGAAGTAA | 2844 | 0.4075 | MSLRNQASILVSIKQDFEANTSLKSWDMSNYMFLCTWDGIQCDQKNRSVVSLDISNLNVSGTLSPSITGLKNLVSVSVAGNGFSGEFPADIHKLQMLRFLNISNNMFSGNMSWEFSELKELQVLDAYNNEFNCSLPLGVSDVPKLKYLNFGGNYFSGEIPPRYGNMVQLNFLSLAGNDLRGFIPSELGNLTNLTQLFLGYYNQFDGGIPPDFGKLVNLVHLDLANCGLKGPIPAELGNLNKLDTLFLQTNQLSGSIPSQLGNLSSLKSLDISNNELIGDIPNEFSGLHELILLNLFINRLHGEIPTFIAELPKLEVLKLWHNNFTGAIPSKLGQNGKLTELDLSTNKLTGLVPKSLCLGKRLKILILLNNFLFGSLPDELGQCYTLQRVRLGQNYLTGSIPNGFLYLPELSLLELQNNYLSGWLPHETSTVPSKLGQLNLANNRLSGSLPTTIGNFPNLQILLLYGNRFSGDIPPDIGRLKSILKLDMSVNNFSGSIPPEIGNCSFLTYLDLSQNQLSGPIPVQVSQIHILNYLNVSWNNLNQSLPKELGAIKGLTSADFSHNNFSGSIPEVGQFSVFNSTSFVGNPQLCGYDLNPCNHSSTTILESQDTGNSKPGVLVLACSLVFTIFAIVKSRKGRRHSNSWKLTAFQKLAYGSEDIVGCIKESNIIGRGGAGVVYGGTMPNGEQVAVKKLLGINKGCSHDNGFSAEIRTLGRIRHRYIVRLLAFCTNRETNLLVYEYMPNGSLGEVLHGKRGEFLQWDTRLKIATEAAKGLCYLHHDCSPLIIHRDVKSNNILLNSEFEAHVADFGLAKFLQDTGTSECMSSIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGEEGIDIVQWTKLQTNWSKEKVVKILDGRLSHIPLDEAEQLFFVAMLCVQEQSVERPTMREVVEMLAQAKQPNTFQVK. | 948 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca7g00470 | 947 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 168 | 937 | - | - | |
Seca7g00470 | 947 | Gene3D | Ribonuclease Inhibitor | 3 | 160 | IPR032675 | - | |
Seca7g00470 | 947 | Gene3D | Phosphorylase Kinase; domain 1 | 641 | 740 | - | - | |
Seca7g00470 | 947 | ProSiteProfiles | Protein kinase domain profile. | 663 | 943 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca7g00470 | 947 | Gene3D | Ribonuclease Inhibitor | 259 | 336 | IPR032675 | - | |
Seca7g00470 | 947 | Gene3D | Transferase(Phosphotransferase) domain 1 | 741 | 946 | - | - | |
Seca7g00470 | 947 | FunFam | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 | 5 | 114 | - | - | |
Seca7g00470 | 947 | Gene3D | Ribonuclease Inhibitor | 337 | 601 | IPR032675 | - | |
Seca7g00470 | 947 | SUPERFAMILY | RNI-like | 51 | 396 | - | - | |
Seca7g00470 | 947 | SUPERFAMILY | Protein kinase-like (PK-like) | 657 | 935 | IPR011009 | - | |
Seca7g00470 | 947 | FunFam | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 | 203 | 308 | - | - | |
Seca7g00470 | 947 | FunFam | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 | 315 | 601 | - | - | |
Seca7g00470 | 947 | FunFam | Leucine-rich repeat receptor-like serine/threonine-protein kinase | 741 | 947 | - | - | |
Seca7g00470 | 947 | FunFam | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 | 115 | 202 | - | - | |
Seca7g00470 | 947 | SMART | LRR_typ_2 | 407 | 438 | IPR003591 | - | |
Seca7g00470 | 947 | SMART | LRR_typ_2 | 166 | 190 | IPR003591 | - | |
Seca7g00470 | 947 | SMART | LRR_typ_2 | 336 | 358 | IPR003591 | - | |
Seca7g00470 | 947 | SMART | LRR_typ_2 | 215 | 239 | IPR003591 | - | |
Seca7g00470 | 947 | SMART | LRR_typ_2 | 263 | 286 | IPR003591 | - | |
Seca7g00470 | 947 | SMART | LRR_typ_2 | 311 | 335 | IPR003591 | - | |
Seca7g00470 | 947 | SMART | LRR_typ_2 | 456 | 480 | IPR003591 | - | |
Seca7g00470 | 947 | FunFam | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 | 632 | 740 | - | - | |
Seca7g00470 | 947 | Gene3D | Ribonuclease Inhibitor | 161 | 258 | IPR032675 | - | |
Seca7g00470 | 947 | Pfam | Leucine rich repeat N-terminal domain | 5 | 43 | IPR013210 | - | |
Seca7g00470 | 947 | ProSiteProfiles | Leucine-rich repeat profile. | 337 | 358 | IPR001611 | GO:0005515 | |
Seca7g00470 | 947 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 785 | 797 | IPR008271 | GO:0004672|GO:0006468 | |
Seca7g00470 | 947 | SUPERFAMILY | L domain-like | 338 | 597 | - | - | |
Seca7g00470 | 947 | SMART | serkin_6 | 663 | 935 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca7g00470 | 947 | Pfam | Leucine Rich Repeat | 265 | 287 | IPR001611 | GO:0005515 | |
Seca7g00470 | 947 | Pfam | Protein tyrosine and serine/threonine kinase | 665 | 935 | IPR001245 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca7g00470 | Seca-Chr7 | 4903876 | 4907912 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca7g00470 | 18 | 937 | Receptor kinase-like Gene Family | AT5G65700 | 58.387 | 0.0 | 1096 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Seca7g00470 | PK_Tyr_Ser-Thr | 2.4e-45 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca7g00470 | - | - | gmx:100816158 | 1647.87 |