Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00444 ATGGAAAGTTATAGTAATTGTGAGAGAAGGCAGTACAACAAATCAGGAATTTCACGCCTGCGGTGGACACCTCAACTCCATCAACAATTTGTTCAAGCTGTTCAAACTCTTGGTGGAAAACAAAAGGCAACTCCAAAGCGAATTTTGCAGCAGATGCGTGTGAAAGGATTGAGAATCGCTCACATCAAAAGCCATCTTCAGATGTACAGAAACACGAAAGGACGTCATGCCATTGATCTGGCACCAGTAGTAGATCAGTTGCTTAGTGATGATGTGTCAAATGATGAAGAAGAAAATTACAAGATGATTAAATTTCGAGATCTCTCATTGCCTCTGATTTCAATGATGCATAGTGAGAATGGCCAACAAAATTTGTGTTTTTCGTCATCAATTGCAGCTGGTGGTAATCATTCCGTTGATTCTAGTTCTAGTTCTATACCCTCTTTTAGAAACAATTATATCAATTTAGACCTAACAATCTGA 483 0.3851 MESYSNCERRQYNKSGISRLRWTPQLHQQFVQAVQTLGGKQKATPKRILQQMRVKGLRIAHIKSHLQMYRNTKGRHAIDLAPVVDQLLSDDVSNDEEENYKMIKFRDLSLPLISMMHSENGQQNLCFSSSIAAGGNHSVDSSSSSIPSFRNNYINLDLTI. 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00444 160 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 7 97 IPR046955 GO:0003700
Seca7g00444 160 Pfam Myb-like DNA-binding domain 20 70 IPR001005 -
Seca7g00444 160 Gene3D - 18 74 - -
Seca7g00444 160 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 74 IPR017930 -
Seca7g00444 160 NCBIfam myb-like DNA-binding domain, SHAQKYF class 19 72 IPR006447 GO:0003677
Seca7g00444 160 FunFam Two-component response regulator 13 76 - -
Seca7g00444 160 SUPERFAMILY Homeodomain-like 18 71 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00444 Seca-Chr7 4639878 4641469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00444 10 73 G2-like Transcription Factor Family AT2G42660 64.062 7.75e-24 92.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Seca7g00444 Myb_DNA-binding 4.8e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00444 - - gmx:102661690 158.688