Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00437 ATGTGTATTGGAAAAGGAGAATTCAAAGTGAGTGTAACTAAGGAGGAGGTGGTGGCGGCAGTGCTGCCACTGCAACACTACTGGCTGCCACTCTCTAACCTTGATCTACTTCTTCCCCCTTTGGACGTCAGCGTTTTCTTTTGCTACAAAAACAACACATTAAGCTTTGGATCCATGGTGGGGACTCTGAAAAGTGCCTTAGCTGAGGCTCTTGTTTCCTATTATGCATTTGCTGGAGAAGTGGTGGCTAACTCCATGGGTGAACCAGAGCTACTTTGCAATAACCGTGGGGTGGATTTTGTAGAAGCAGTGGCTGATGTTGAGTTAGAGTCCCTTAATCTCTACAATCCAGATGACACCATTGAAGGGAAACTTGTCCCAACCAAGAAGCATGGTGTCCTTGCTGTTCAGGCAACTCGGCTGAAGTGTGGTGGGTTAGTAGTGGCATGCACTTTTGACCATCGCATCGCAGATGCATACTCTGCAAACATGTTCCTTGTATCATGGGCCGAGATAGCCCAACCCAACAAGCCCACAACCTCAATACAACCCTGTTTCCGACGGTCCCTTCTCATCCCACGACGCCCACCTTCCATTGACCCTTCACTCCATCACATGTACGTCCCTATCTCTGAGTTCACACCTTCACCCGAATCTGGATTTGAATCCAACCCAATTGTGAGCCGCATATATTACATTACAAGCGAACAACTCAATTGTTTACAATCACTAGCTAACTCAAATGGCACTAAACGCACAAAACTCGAGGCCTTCTCTGCATTCTTGTGGAAAATGGTTGCCACAGCAGCTGTCAAAATTGATGGTAAAAAATGGGTTGTTTCTAAGATGGGCATGGTTGTTGATGGAAGGAAGAGGCTCAACAAAGAATCAATTATGGATTCATATTTTGGGAACGTGCTTTCGATTCCATATGGTGGGAAATCATTGGAGGAGCTTGTTGAAAAGCCGATAAACTGGGTGGCTGAGCAAGTTCATGAGTTCTTGGAAACGGCGGCGACAAAGGAGCATTTTTTAGGGTTGATTGATTGGGTGGAAGCACATCGCCCTGTGCCTGGGTTGTCTAAGATTTATTGTGTCAATGCTAAGGAAGAGGGACCGGCTTTTGTGGTTTCTTCAGGGCAAAGGTTTCCAGAGTCAAAGGTGGATTTTGGATGGGGAAAGCCTGTTTTTGCATCCTACCATTTTCCTTGGGGTGGAGATTGTGGCTATGTAATGCCAATGCCTAGTTCTAAAGGTAATGGTGATTGGTTGGTCTACATGCACCTTCGAAAAAGTTACTTACACTTCATGGAGTCACAAGCTTCCCATTTCTTTAGGCCCTTCTCTTGGGATTGTGTCCTAGATTAA 1368 0.4576 MCIGKGEFKVSVTKEEVVAAVLPLQHYWLPLSNLDLLLPPLDVSVFFCYKNNTLSFGSMVGTLKSALAEALVSYYAFAGEVVANSMGEPELLCNNRGVDFVEAVADVELESLNLYNPDDTIEGKLVPTKKHGVLAVQATRLKCGGLVVACTFDHRIADAYSANMFLVSWAEIAQPNKPTTSIQPCFRRSLLIPRRPPSIDPSLHHMYVPISEFTPSPESGFESNPIVSRIYYITSEQLNCLQSLANSNGTKRTKLEAFSAFLWKMVATAAVKIDGKKWVVSKMGMVVDGRKRLNKESIMDSYFGNVLSIPYGGKSLEELVEKPINWVAEQVHEFLETAATKEHFLGLIDWVEAHRPVPGLSKIYCVNAKEEGPAFVVSSGQRFPESKVDFGWGKPVFASYHFPWGGDCGYVMPMPSSKGNGDWLVYMHLRKSYLHFMESQASHFFRPFSWDCVLD. 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00437 455 Gene3D - 8 209 IPR023213 -
Seca7g00437 455 Pfam Transferase family 8 443 - -
Seca7g00437 455 Gene3D - 212 439 IPR023213 -
Seca7g00437 455 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 26 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00437 Seca-Chr7 4571230 4573908 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00437 9 420 Monolignol Biosynthesis Gene Families AT5G48930 26.682 7.61e-39 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00437 - - gmx:100809201 681.789