Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00430 ATGGCAAAATGTGGAGAAGAATCCCATAGTTTCTCCTATGATGTTTTCATCAGTTTCAGAGGTGAAGACACAAGGCACAAATTTATAGGACATCTTCGTAAAGAGTTGTGTAGGAAGGGAATCAACACTTTCATAGATGATAAGAATCTGAGGATAGGGGAAGGTATTTCACCTGCTCTTTCCAAAGCCATAGAAGAATCAAAGATTTCAATTGTTGTGTTTTCTGAGAATTATGCATCTTCCAAGTGGTGTCTTGATGAACTTGTGAAGATACTAGATTGTACTAAGAGGAGTGGCAACAAAAAACAAGTTGCTTTCCCAATTTTTTATCATGTAGATCCATCACATGTACGGCATCAGAAAGAGAGTTACCACAAAGCAATGATTGCACACGAGGATAGATTCGGCAAAAGTTCAGAAAAAGTGTGTAGATGGAGATCAGCTTTGTTTGAAATAGCCAACTTAAAAGGCCAGCATATTAGTACCGGGTATGAAATTGATTATATTGAAGAGATTGTTGAGCAGGTCTATGCTAACATAGCTCCTAAACCTTTAGGTGTTGGTCAAAACCCAGTTGGCCTTGAGCACCGCATAGAAGAAGTGAAGTCACTTCTAGACATGGAGCCTACAGATGACACAGTATGCATGTTGGGGATATATGGACTTGGTGGAATAGGGAAAACAGAACTTGCCAAAGCTTTGTATAACAAGATTGTACACCAATTTGAAGCTGCAAGTTTTCTTGCCAATGTCAGAGAAAAATCAAACAAAATCAATGGCATGGAAGATCTACAAAAGACACTTCTATCAGAAATGTTGGAGGAGTTAGAAACTGAGTTGGGCAGTCCAAGTAAAGGAATCTATGAAATCAAACGCAAGCTTGGCAAGAAAAAAGTACTTTTGGTTCTTGATGATGTTGATGATAGAGAACAGTTAAAGAATCTAGCAGGAGGGTGTGATTGGTTTGGTTTAGGTAGCAGGATCATTATAACAACAAGGGACAGAAAATTGCTTCTTGGTCATCAAGTTGAAAAGATTTATGAAATGACAGAACTTGATTATCAACATTCTCTTGAGCTATTTTGTCAGAATGCCTTTGGAAAGAGTCATCCTGAAACAGGCTATGAAGATATGTCATCTCTTGCAGTAGGTTATGCCAAGGGTCTTCCATTGGCTTTAAAAGTAATAGGCTCCAATTTGGCTACTGAAAGAAGTTTAGAGGATTGGGAACTTTTATTGAAAAAATATGAGAGGATTCCAGATTCAAAGATTCAACATGTGCTCAAAATAAGCTACAATAGTTTGGGGGATGATGATGCCAAGAGTATTTTCCTAGACATAGCTTGCTTCTTCAAAGGGGAGAGAATAGAATATGTTGAAAAAATACTTGAGGAATTTGATGCAACATCTAATATTAAAGTTCTTGTTAATAAATCTCTCCTAAATGTTGAACATGGTTGCTTGGAGATGCATGACTTAATACAAGATATGGGTAGAGAGATTGTTAGGCAGGAGTCAAGAATTCCCAGCAAACGTAGCAGATTATGGTCACATAAAGATGTTCTGAAAGTATTAACTGAAGATCCTGGAAGTGAAGCAATTGAAGGGATAATTCTTGATCCCCCACAACGAGAAGAAGTAGAATGGAGTGGTACTGCCTTTGAGGAGATGAAATGGCTCAGGATTCTCATTGTTCGAAATACAACATTTTCAACATGGCCTAAATATTTACCAAATCATTTAAGATTGCTTGATTGGGAGGAGTACCCTTCAGAGTCTTTCCCATCAAAATTTCATCCCAAAGAAATTGTTGTCTTCAATTTGTGCAAAAGTCGTCTTACTCTAGAAGAGCCATTTAAGAAATTTTCATGTTTGATTAACATGGATTTGTCACATAATGAGTTTATCACTACAATGCCTGATGTGTCAGCAGTTCAAAATTTGAGAGAGTTGAGACTTGATAAATGTAAGAATCTAATTGAAGTTCATGAATCTGTTGGATTTCTCAAAAAGCTTGCTCATTTAAGCGCTTCAGGATGCATTAAACTTAAGAGTTTCCTGCATAGAATGTTTTTACCATCTCTTGAAGTCCTTGACCTTAATTTATGTGCAAGACTTGAACACTTCCCTGATATAGTGAACAGCATGAATAAGCCATTGAAGATTTATCTGATAAATACTGCTATTAAAGAGCTACCAGATTCCATTGATAAACTTATTGGGCTTGTTTGTATAGAGATACCAAGTAGCACAAAACTGAAATATCTACCAAGTAGTTTATTCACATTACCAAATGTTGTTGCCTTTAAAATGGGTGGATGTTCCCAACTTCGAGAATCCTTCAGAAGGTTTGCACAAAGCCCTTCAGCAGCCAATGGTTGTCCTGCGAAAACATTGAACTTCGGAAATGGTGGTTTGTCAGATGAAGATCTTCAAACAATTCTCAATTGCTTTCCAAAATTAGAAGAGTTGATTGCATCAGAGAACAATTTTGTATCTCTCCCTGCATGCATTAAAGAGTCCATACACTTGACAAGTCTTGATGTTAGTGTTTGCAAGAAGCTTCAAGAAATTCCTGAATGCACCAACTTGAGAATTCTTAACGTCCATCGTTGTATGAAGCTTAAATACATTTCAGAGTTGCCATCTACTATTCAAAAAGTTGATGCAAGATACTGCTTCTCCCTAACTAAAGAGACGTTGGACATGTTATGGTATCAGGTGTCAAAGGAGATACGTGGATTAGAAATTGTGATGCCCCAAACTGAGATTACAGAAAGGTTTGACTTTATTGACAATGGAGGTAATCCACGCTTCTGGGTTCGTGGGAAGTTCCCTCGTGGGAAGTTCCCTGTTTTTGCCTTAGCATTGGTGTTTCGTGATGTTAATGAAAAGGCAAGTAATTCTCGGCGGCAACTTGTTGAGCTTCAGTTAATCATCAACGGTCAATGTGTGCCTCACAAAGGCTATTACAGCTTCAGAATTGCAGCAGATCATGTGTTAGTTTGTGATCTACGACTTGTGTTTAGTGAAGAGGAGTGGAAGGGCCTTGATTCATTTCTTGTTCATGATTGGAATCTAGTGTTGGTTTCATATGAAGCACCATCCACCATGACACTAAGCTGTTGGGGAGTTTTTATGTACAAACAAGAAACCAACATGGAAGATGTCCAGTTCATGTGTCCCGACCCAATTAAGTACTCAGATATGGCACTCATATCACCACCAACAATTCTCAGAAGAGATCCTAAGCAGGAACTAAGGAAGATGATAGACCAAATGTGTCTGGATGAAATGTTTGATGGGATGTTGATGGAAACCATGGACTATGAAAATCGAGATGACTTTGCAGATAAAGGTTTTGCTGTGGAACAGATGCATGTTCTAATGGGAGGTTTGAAGGAGATATCAACACAGGCTAAGGATGTATTGGAAGGCAAAGCAGTAGCTAATAAAAACTCCACCTTGGCAATGTTTCTAGAGGCTATGGAGAAACTTAATGAGGAAGCTAAGAAAGATGGGCAAGAAACCATTTTCTTTAAGGATCTCGCTTTAATACGACTAAAGGATGGAGTGAAGTCACCTATGGAAGTAGGAGAAGCCTCAACCTCTGGCCATCAAGGAAGTTCAAGCAGTGATCCTCAGCAGCAGGAAATAATTATGGAGATTTTCTCAGAAGGAATGGTTACAGGACTTCTTGAAGCACAAAATAGCTTTCCTACTCTCGATATAGAGACAACCATGCATGCTGCCTTAGAAAAGGGTAACAGGGTTAGATGGTCACCCCCAGAGTCAGAGGTAGAAAAGCCTGTAGACCAAGTAGAAAGGAAGATATACATGGAAGGAGTTATCAATGGACTCCTTGAAGCACAATTGAGCTTTCCCACTCTGGACATACAAGCAACACTAGATGCAGTGCTACTAAAGTATGGAGGGAAGCCACCTAATGAAGTAGTAGGAGAAGTCTCAAGCTCTAGCCATCAGCAAGAAAGCTCAGAGACACAAAGTAGTGATCCTGAGCAGCGGCAAATAATGATGGAGATGTTTTGGGATGGAGTGTTGGATGGACTAAATGAAGTAAAGAATAAGTTTCCTTCTCTTCATATAGGGAGAACTGTAACTGAGGTCTTTAACAAGGGTAATAGGGTTAGATGTTCCAACCCTGGAACTCCAATGGAAAAGAGGATATATATTGAAGGAATTGTCAATGGCCTCTTTGAAGCACAACTAAGCTTTCCCACTCTGGACATAAATGCAACACTAGATACTGTGTTGAGTAAGGGGGGCCGTAAAGTTGCAGATAAGAAAGGTAAGCAACCTATGGATGTAAGAGATAGAGAAGCCTCAACCTCTAGCCATCAAGAAAGTTCAAAGGAACAACAAAGCATTGATCCTCAAAAGCAAGAAATAATGAGGGAGAATTTGTTGCTTGGAATGTTGGATGGACTTCTTGAAGCAAAGAGTAACTTTCCTACTCTTGATGTAGAGACAACCATTTTTGCTGCCTTAAACAAGGGTAATAGGTTTAAATGGTTAATCCCAGACTCCGAGATAGAAATCCCTGAAGGCCAACGTGAAGATCCACTGGCCCGTCTAAAAAGGAAGATGTACATGGAAGGAATTATCAACGGACTCATTGAAGCACAGTTGAGCTTTCCCACTCTGAACATACAAGCAACAGCAGATGCTGTGTTAAGTAACGGACCCCGTAGAGGACGACCTATAGTTCCAAGCTCTGATGATCCTTTGTTGCAAGCATTCAAGATGATGGATCAAGAAAGTTGTGAAGCTGAGGCAAGGAGTAAACTCTATTGGAACTTGATAGAGGAACATAGAGCTCTACGCAAGAAATTTGAACAAGTGGAGAATGGAACTGCTGCTTCAGATAAAGATAGCTGTCTTCTTACTTGGAAAGATCAATATGATGAACTGCTAGAGAAGCTCAACACTCAATTTGCTTTGAGTAGCACAGAGATACACACAGACATTACAAAATATGAGAAGTTGGTTGCTGTTTTGCAAGGAAGAGCTGAAGAATTGAAGAGGCTTTATGATGCTAGCATTGAAGGCTTCCAGAACTCAAAAGAGTTTCAAGATTTAATGAGTGTCATATACTTGTATGGACTGAGGGATGGACTACTTGAAGCACAAGTGATCTTACTAGCTCTGGACATGTTCTACATGGACAGAACAACTCCAGTGTTTAAGGAGAACGAGGAGTGTGTAGTGACTGATGAGGCTGCCAAAGAAGTATTAGATTGGACTAAAGAGAAAGTTGCAAGCTCTGACGATTCTTTGTTGCAAGTATTCATGATGATGAAGCAAGAAAGTTGTGAATCTGAGACCAAGAGTAAGCTGTACTGGAAGTTGATTGTGGAACACAAAGCTCTGCGCAATAAATTTGAAGAATTTGAAATTGAAACTGTTTCTCTAGATAAAGATAGTTGTAATCAATATGAAGATTTGCTAGAGAAGTTCAACACTCAATCTGCTGAATTTATTTCAGAGAAGCAACACAACCTTGATGGTACTGAGGATGTCCAGGAAAAGGCAACAAAGATTTCTGATTCAAAATCTGCTTTGAGTAACGCAGAGATGCAGATATACAATGGAAAAGAAGGCTGCAGGGGTGTCACAAAATATGAGAAGCTGGCTGCTGTTTTGAAAGGAAGGGCTAAAAAATTGAAGAGGCTTTATGATGATGGCATTGAAGGCTTCCAGAACTCAGAAGAGTTTCAAGATCTAATGAGTGTAATATACTTCAATGGATTGAAGAATGGACTCCTTGAAGCACAGGTGATCCTACTTGCTCTGGACATGGACAGAATGACTCCTCCATTGCTTAAGGAGAATGAGGAACATGTTACTCATGAGGCAGCTGATAGTGAAAATCTTGATGGTTCAATTAGTGCAGCAGAAATTCCAAGTCCTACTGATCCAAAAGTTGACAACCCTCCTGATACTTCTGAATCCTCTGGTGAAGAGGTTTTTGTCAACTTTGAGGATTTTGGTCACATGTTTTTTTAA 6027 0.3919 MAKCGEESHSFSYDVFISFRGEDTRHKFIGHLRKELCRKGINTFIDDKNLRIGEGISPALSKAIEESKISIVVFSENYASSKWCLDELVKILDCTKRSGNKKQVAFPIFYHVDPSHVRHQKESYHKAMIAHEDRFGKSSEKVCRWRSALFEIANLKGQHISTGYEIDYIEEIVEQVYANIAPKPLGVGQNPVGLEHRIEEVKSLLDMEPTDDTVCMLGIYGLGGIGKTELAKALYNKIVHQFEAASFLANVREKSNKINGMEDLQKTLLSEMLEELETELGSPSKGIYEIKRKLGKKKVLLVLDDVDDREQLKNLAGGCDWFGLGSRIIITTRDRKLLLGHQVEKIYEMTELDYQHSLELFCQNAFGKSHPETGYEDMSSLAVGYAKGLPLALKVIGSNLATERSLEDWELLLKKYERIPDSKIQHVLKISYNSLGDDDAKSIFLDIACFFKGERIEYVEKILEEFDATSNIKVLVNKSLLNVEHGCLEMHDLIQDMGREIVRQESRIPSKRSRLWSHKDVLKVLTEDPGSEAIEGIILDPPQREEVEWSGTAFEEMKWLRILIVRNTTFSTWPKYLPNHLRLLDWEEYPSESFPSKFHPKEIVVFNLCKSRLTLEEPFKKFSCLINMDLSHNEFITTMPDVSAVQNLRELRLDKCKNLIEVHESVGFLKKLAHLSASGCIKLKSFLHRMFLPSLEVLDLNLCARLEHFPDIVNSMNKPLKIYLINTAIKELPDSIDKLIGLVCIEIPSSTKLKYLPSSLFTLPNVVAFKMGGCSQLRESFRRFAQSPSAANGCPAKTLNFGNGGLSDEDLQTILNCFPKLEELIASENNFVSLPACIKESIHLTSLDVSVCKKLQEIPECTNLRILNVHRCMKLKYISELPSTIQKVDARYCFSLTKETLDMLWYQVSKEIRGLEIVMPQTEITERFDFIDNGGNPRFWVRGKFPRGKFPVFALALVFRDVNEKASNSRRQLVELQLIINGQCVPHKGYYSFRIAADHVLVCDLRLVFSEEEWKGLDSFLVHDWNLVLVSYEAPSTMTLSCWGVFMYKQETNMEDVQFMCPDPIKYSDMALISPPTILRRDPKQELRKMIDQMCLDEMFDGMLMETMDYENRDDFADKGFAVEQMHVLMGGLKEISTQAKDVLEGKAVANKNSTLAMFLEAMEKLNEEAKKDGQETIFFKDLALIRLKDGVKSPMEVGEASTSGHQGSSSSDPQQQEIIMEIFSEGMVTGLLEAQNSFPTLDIETTMHAALEKGNRVRWSPPESEVEKPVDQVERKIYMEGVINGLLEAQLSFPTLDIQATLDAVLLKYGGKPPNEVVGEVSSSSHQQESSETQSSDPEQRQIMMEMFWDGVLDGLNEVKNKFPSLHIGRTVTEVFNKGNRVRCSNPGTPMEKRIYIEGIVNGLFEAQLSFPTLDINATLDTVLSKGGRKVADKKGKQPMDVRDREASTSSHQESSKEQQSIDPQKQEIMRENLLLGMLDGLLEAKSNFPTLDVETTIFAALNKGNRFKWLIPDSEIEIPEGQREDPLARLKRKMYMEGIINGLIEAQLSFPTLNIQATADAVLSNGPRRGRPIVPSSDDPLLQAFKMMDQESCEAEARSKLYWNLIEEHRALRKKFEQVENGTAASDKDSCLLTWKDQYDELLEKLNTQFALSSTEIHTDITKYEKLVAVLQGRAEELKRLYDASIEGFQNSKEFQDLMSVIYLYGLRDGLLEAQVILLALDMFYMDRTTPVFKENEECVVTDEAAKEVLDWTKEKVASSDDSLLQVFMMMKQESCESETKSKLYWKLIVEHKALRNKFEEFEIETVSLDKDSCNQYEDLLEKFNTQSAEFISEKQHNLDGTEDVQEKATKISDSKSALSNAEMQIYNGKEGCRGVTKYEKLAAVLKGRAKKLKRLYDDGIEGFQNSEEFQDLMSVIYFNGLKNGLLEAQVILLALDMDRMTPPLLKENEEHVTHEAADSENLDGSISAAEIPSPTDPKVDNPPDTSESSGEEVFVNFEDFGHMFF. 2009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00430 2008 Gene3D Ribonuclease Inhibitor 546 718 IPR032675 -
Seca7g00430 2008 Gene3D Ribonuclease Inhibitor 719 904 IPR032675 -
Seca7g00430 2008 MobiDBLite consensus disorder prediction 1317 1341 - -
Seca7g00430 2008 SMART till_3 12 155 IPR000157 GO:0007165
Seca7g00430 2008 Pfam TIR domain 13 177 IPR000157 GO:0007165
Seca7g00430 2008 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 189 447 IPR027417 -
Seca7g00430 2008 SUPERFAMILY L domain-like 490 880 - -
Seca7g00430 2008 ProSiteProfiles TIR domain profile. 11 180 IPR000157 GO:0007165
Seca7g00430 2008 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 712 IPR044974 GO:0006952
Seca7g00430 2008 MobiDBLite consensus disorder prediction 1428 1453 - -
Seca7g00430 2008 MobiDBLite consensus disorder prediction 1956 1995 - -
Seca7g00430 2008 Coils Coil 1663 1683 - -
Seca7g00430 2008 MobiDBLite consensus disorder prediction 1196 1215 - -
Seca7g00430 2008 Gene3D - 351 436 IPR042197 -
Seca7g00430 2008 FunFam Disease resistance protein (TIR-NBS-LRR class) 9 181 - -
Seca7g00430 2008 Pfam NB-ARC domain 195 430 IPR002182 GO:0043531
Seca7g00430 2008 Gene3D - 7 183 IPR035897 -
Seca7g00430 2008 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 157 IPR035897 -
Seca7g00430 2008 MobiDBLite consensus disorder prediction 1319 1341 - -
Seca7g00430 2008 MobiDBLite consensus disorder prediction 1428 1467 - -
Seca7g00430 2008 Gene3D - 184 346 IPR027417 -
Seca7g00430 2008 PRINTS Disease resistance protein signature 690 706 - -
Seca7g00430 2008 PRINTS Disease resistance protein signature 386 400 - -
Seca7g00430 2008 PRINTS Disease resistance protein signature 216 231 - -
Seca7g00430 2008 PRINTS Disease resistance protein signature 293 307 - -
Seca7g00430 2008 Coils Coil 1149 1169 - -
Seca7g00430 2008 MobiDBLite consensus disorder prediction 1200 1215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00430 Seca-Chr7 4510626 4518987 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00430 8 787 WRKY Transcription Factor Family AT4G12020 31.026 1.72e-89 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00430 - - gmx:121173506 1740.7