Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00429 ATGGAGAAGAGTCCCCATAGTTTCTCGTATGATGTTTTCGTCAGTTTTAGAGGTGAAACACGGCACAAATTTATAGGACATCTTGTTAAAGAGTTGCGCCGAAAGGGAATCAAATATTTCATTGACGATAAGGATTTGAGGATAGGGGAAGATATTTCACCTGCTCTTTCCAAAGCCATAGAAGAATCTAAGATTTCAATTGTTGTCCTTTCTGAGAATTATGCATCTTCCAAGTGGTGTCTTAATGAACTTGTTCACATCCTAGACTGTGCAAAGAGGAGCGGCAACAAAAAACAAAAACAAATTGTTTTCCCAGTTTTTTACCATGTAGATCCCTCAGATGTACGGCATCAGAGAAGTAGTTATGGCGAAGCAATGGCTCAACACGAAAAGAAGTTTGGCGAAAACTCAGAAAAAGTTCGGAGATGGAGATTAGCTTTGTCTCAAGTCGCTAACTTAAAAGGGGAACAAATCAATACCGGGTACGAAAATGATTTTATTGAAAAGATTATTAAGCAACTTTCTGCTGACATAGCTCCTAAGACTATAGATGTTGGTCCAAACCCCATTGGACTTGAGCATCACATAGAAAAGTTGAAGTCACTTTTAGACATAAAGCCTAACGATGACTCTGTATGCATGTTGGGCATATATGGACTTGGCGGAATAGGGAAAACAAAACTCGCCAAAGTTTTGTACAACAAGATTGTCAACCAATTTGAAGCTGCAAGTTTTCTTGCCAATGTCAGAGAGAAATCAAGCAAAAGCAATGGCCTGGAAGAATTGCAAAAGACACTTCTATCAGAGATGTTGGAGGAGCTAGAAACCAAGTTGGGAAGTACAAGTAGAGGAATCTATGAAATAAAATGCAAGCTTGGAAAGAAAAAAGTTCTTTTGGTTCTTGATGATGTTGACGACAGAGAACAGTTGAATAGCCTAGCAGGAAGCTGCTATTGGTTTGGTTTAGGTAGTAGGATCATTATAACAACAAGGAATAAAGATTTGCTTATTGGTCATCAAGTTGAAAAAATTTATAAAATGACAAAGCTTAATGATCAACATTCCCTTGAGCTCTTTTGTCAGCATACATTTAGAAAGAGCTATCCTGAAATAGGCTATGAAGACATGTCTTCTCGTGCAATAGGTTATGCTAAGGGTCTTCCATTGGCCATAGAAGTAATAGCCTCCAATTTGACTGTTGAAAAATGTCCAAAATATTGGGAATATGCATTGGAAAAATATGAGAGGATTCCAGATCAAAAGATTCAAGATGTGCTCAAAATAAGCTATGATGGATTACAAAAAGATGCCAAGAGTGTTTTCCTAGATATAGCTTGCTTCTTCAAAGGGGAGAGAACAGAATATGTTGAAAAGATACTTGAGGAATCCAATGCAACATTTAATATTAAACTACTTGTTAACAAATCTCTCTTAACAATTGAACATGGCTGCTTGGAGATGCATGATCTAATACAAGATATGGGCAGAGAGATTATTAACCACGAGGCAGAAATTCCAAGTGAACGAAGCAGATTATGGGTTCATGATGATGTTATTAATATATTAACTGAAGATTCTGGAAGTGAAAAAATTATAGGTATAATGCTTGATCCACCCCAAAGAGAAGAAGTGGATTGGAATGGTACAGCCTTTGAGAAGATGAAATGGCTCAGAATTCTCATTGTTCGAAATACATCCTTTACAACAGGGCCGAAACATCTGCCAAATCAATTAAGGAAATTTTCATGTTTGACTAACATGAATTTCTCACATAATCAATCTATCGCCACAATTCCTGATGTGTCAGAAGTTCCAAATTTGACAAAACTGAGACTTGATAATTGTAGAAACCTAACTGTGGTTCATGAATCCGTTGGATTTCTCAAAAATCTTGCTCACTTTAGTGCTTCAGGATGCCACAAACTTAGAATTTTCCTGCAAAGAATGTTTCTACCATCTCTGGAAGTCCTTGACCTTAATTTATGCATAAGACTTGAACACTTCCTAGACATAATGAACATCATGAATAAGCCATTGAAGATTTATATGATAAATACTGCTATTAAGGAGATACCAGATTCCATTGGTAATCTTACTGGGCTTGTTTGGATGGAGATACCAAGTAGCATGAAACTTATATATCTTCCAAGTAGCTTATTCTTGCTACCAAATATTGTTGCCATTAAAATTAGTGGATGTTCTCAACTTCAAGAATCCTTCAGAAGGTTCGTCCATGGCCCTTTAGCAGCCAATGGTCATCCAACACTAAAAACACTATTTTATGGAAAAGGTGGTTTGTCAGATGAAGATCTTCATGCAATTCTCAATCTTTTTCCAAGATTAGAAGAGTTGATCGTGCCAGAGAACAATTTTGTATCTATCCTTGCATGCATTAAAGAGTCTGTTCACTTAACAAGCCTCGATGTGAATGCTTGCAAGAAACTTGAAGAAATTCCTGAATGCACTAATGTGAGAATTCTTAATATCCATGGTTGTGTGAATCTTAAAGACATTTCAGAGCTGTCATCTACTACACGGAAAGTAGATGCAAGATATTGCTTCTCCCTAGCTAAAGAGACATCACACATGCTATGGTATCAGGTGTTCAAAGAGATACATGGATTAGAAGTTGTGATGCCCACCCTAACTGAGATTCCAGATTGGTTTAGCTTTAGAGGCATTGGAGGGAATCCACATTTCTGGGCTCGTGGAAAGTTTCCCATTGTTGCTATAGCTTTGGTGTTTCAGGGCGTGAAGGAAATAACCAATAATAAATCTCGTCGCCAACTTGTTGAGCTTCAGTTGTTTATCAATGGTCAATGTGTGCCTCGCAAAGGCTATTACAATTTCAAACTAGAAAAACACCACGTGTTAATTTGTGATCTACGACTTCTGTTTAATGAAGAGGAATGGATAAGCCTTGATACATTTCTTGAGCATGATTGGAATCTAGTGCAGGTTTCATGCCAATCCCCGTTGAGCATGAAACTAAGTTCTTGGGGTGTTCATGTGTACAAACAAGGAACCAATGAGGAAGATGTCCAATTCATATGTCCAGACCCAAAGTACTCAAAAACAACCAACATATCACTCACTACAGTCCCTTCAAGAGATCCAAAGCAAGAACAAAGGAAAATGATAGAGAGGTTAAGGTTAGATGAACTATTTGATGCGACGTTGATGGAAGCCTTGGATGATAACCCGTTCAACTATTCAGAAGAAGAACTTGTTGTACAAAGAGAGCAATTGAAAGATCTAGCGGCAACTCTACAGAATATTTCGAGACAAGCTAAGGATGTATTAGAAGGAAAAGAGGTAGATGATGTTGATAACTTGCTACCATGGTTGGTAAAGAATATGGATGTAGGAGAAGCCTCAACCTCTAGCCACTCAGAGGAACAAAGCAAAGATCGTCAGCAGCAAGAGTTAAGTGAGATGTTCTGTCAAGGAGTATGGGATGGACTTGTTGAAGCACAAAGTAACTTTCCTACTCTAAATATAGATACAATCATGAGTATTGCCTTAAAGAAAGGTTATAAGTTTAGATGGTTACTCCCAGAAGGCGAAGATCTACTGCTACTACACCAAAAAGATAAGGAGTACGTAGAAGGAATTATCAATGGACTCCAGGAAGCAAAGCTGAGCTTTCCCACTCTGGACATAAAGGCAACAATAGATGCAGTGATGCAACAAAAGTATGGAAAAAAGCCACCCATGGATGTAGGAGAAGCCTCAACCTCCAGCCATCAGCACGAAAGCTCAAAGGAACAGAGCATCGATCCTAAGCAACAACAGATGATGATGGAGATGTTCTGGGATGGAGTGGCAGATGGACTTCATGAAGCAAAGAATAACTTTCCTTCTCTTCATATACAGAAAACTCTAACTTCCATCTTTAATAAGGGTAATAGGGTTAAATGGTTACTCCCAAAAAGTCCACTACCACAACCCCAAGTAGAAAAGAATATATATATTGAAGGAATTGCCATTGGCCTCCTTGAAGCAAAGTTGAGCTTTCCCACTCTGGACATAGATGCAACACTAGATATTGTGTTAAGTAAGGGTTCCCATAAATTTCCAAGCTCTATCGATGAGAAAGGTAAGCAACCCATGGATGTACAAGAACCTTCAAGCTCTAGGCTTGATGAAAGTTCAGAGGAGCAAAACATCGATCCTCAGGAGCTAGAAATAATGAGGGAGAATTTGTGTCGTGGAATGTTAGATGGACTTCTTGAAGCACAGACTAGCTTTCCTACTCTTGATATAGAGACAACCATGATTGAAGCTGTAAAAAAGGGTAGTAGGTTCAAATGGTTAATCCTAGACTCTGAGATAGAAATCCCTGAAGGCGAAGGTGAAGATCCACTAGCTCACCTAAAAAGGAAGATGTACATAGAAGGAGTTGTTAATGGACTCATTGAAGCAAAGTTAAGCTTTCCAACTTTGGACATACAAGCAACACTAACTACGGTGTTAAGTAGAGGGGCTCGCAAAGGACCCGTTGAAGCATCGTCTACAATTCAAGAAGCAGAGGATTCTCCTACAGTGATAGCTTCGAGCTCTAACGTCAATCCTTTGTTGCGAGCATTCATTATGATGAATCAAGAAAGTTGTGAAGTTGAGGCAAGGAGTAAACTCTATTGGAAGTTGATAGAGGAACACAAAGCTCTGCGCAAGAAATTTGAGGAATTTGAGAATGAAATTGATGCTCCAGATAAAGATAATAGTCTTCTTACTTGGAAAAATCGATATGAGGAATTACTAGAGAAGCTCAACACTCAATCTGCTTTGAGTAGCTCAAAGATGCACACAAACATTACAGAATATGAGAAGTTGGCTGCTGTTTTGAAAGGAAGAGCTGATGAATTGCAGAGGCTTTATGATGATGGAATTGAAGGCTTCCAAAACTCGGAAGAATTTCAGGATTTGATGAGTGTCATATACTTGTACGGACTGAGAGATGGACTCCTTGAAGCACAAGTAATCATACTTGCTTTGTACATGGACATAAAAACTTCAGTTTCTAAGGAGAATGAGGAGCAAGTTATTGGTGAGGCTGCCAAAGAAGTATTTGATTGGACCAGAGTGAAAATTGAATGTTTGGATGATCCTTTGTTGCAAGTATTCATGATGATGAAGCAAGGAACTTGTAAATCTGAGGCCAAGAGCAAAATCTACTGGAAGTTGATGGAGGAACACAAAGCTCTGCGCAAGAGATTTGAAGAAGTGACTATTGCTCTAGACAAAGATAGCCACCTCCTTCCTTCTTGGAAAAATCAATATGATGAATTGGTAGAGAAACTCAATACTCAGTCTACTTTAAGTGCCATAGAGATGCACACAAACATTCCAAAGTATGAAAAGTTGGCTGCTATTTTAAAAGGAAGAACTGAAGAATTGCGGAGGCTTTATGATGATGGGATTGAAGGCTTCCAGAACTCAGAAGAGTTTCAAGATCTTATGAATGCAATATACTTGAACGGACTGCAGGATGGACTTCTTGAAGCACAAGCAATTTTACTTGCTCTGGACCTGGACATGGACAAAATAACTCCAGTAGTGTCCATGGAGAATGAGGAAGAGGAACAAGCTACTGATGAGGTTGTTGATAATGAAAATCTCGATGGTTTAGTTGGTGTAGCAGATATTCCAAGTCCTTCTGGTCATGAAGTTGACAACCCTAATGACACTTCTAACCCTTCTGGTTCAGGGGTGTTGTCAATTTTCTGGAATTTCTTCACATATATTATCCTTAGTTGTAGCAGGAATTAA 5772 0.3858 MEKSPHSFSYDVFVSFRGETRHKFIGHLVKELRRKGIKYFIDDKDLRIGEDISPALSKAIEESKISIVVLSENYASSKWCLNELVHILDCAKRSGNKKQKQIVFPVFYHVDPSDVRHQRSSYGEAMAQHEKKFGENSEKVRRWRLALSQVANLKGEQINTGYENDFIEKIIKQLSADIAPKTIDVGPNPIGLEHHIEKLKSLLDIKPNDDSVCMLGIYGLGGIGKTKLAKVLYNKIVNQFEAASFLANVREKSSKSNGLEELQKTLLSEMLEELETKLGSTSRGIYEIKCKLGKKKVLLVLDDVDDREQLNSLAGSCYWFGLGSRIIITTRNKDLLIGHQVEKIYKMTKLNDQHSLELFCQHTFRKSYPEIGYEDMSSRAIGYAKGLPLAIEVIASNLTVEKCPKYWEYALEKYERIPDQKIQDVLKISYDGLQKDAKSVFLDIACFFKGERTEYVEKILEESNATFNIKLLVNKSLLTIEHGCLEMHDLIQDMGREIINHEAEIPSERSRLWVHDDVINILTEDSGSEKIIGIMLDPPQREEVDWNGTAFEKMKWLRILIVRNTSFTTGPKHLPNQLRKFSCLTNMNFSHNQSIATIPDVSEVPNLTKLRLDNCRNLTVVHESVGFLKNLAHFSASGCHKLRIFLQRMFLPSLEVLDLNLCIRLEHFLDIMNIMNKPLKIYMINTAIKEIPDSIGNLTGLVWMEIPSSMKLIYLPSSLFLLPNIVAIKISGCSQLQESFRRFVHGPLAANGHPTLKTLFYGKGGLSDEDLHAILNLFPRLEELIVPENNFVSILACIKESVHLTSLDVNACKKLEEIPECTNVRILNIHGCVNLKDISELSSTTRKVDARYCFSLAKETSHMLWYQVFKEIHGLEVVMPTLTEIPDWFSFRGIGGNPHFWARGKFPIVAIALVFQGVKEITNNKSRRQLVELQLFINGQCVPRKGYYNFKLEKHHVLICDLRLLFNEEEWISLDTFLEHDWNLVQVSCQSPLSMKLSSWGVHVYKQGTNEEDVQFICPDPKYSKTTNISLTTVPSRDPKQEQRKMIERLRLDELFDATLMEALDDNPFNYSEEELVVQREQLKDLAATLQNISRQAKDVLEGKEVDDVDNLLPWLVKNMDVGEASTSSHSEEQSKDRQQQELSEMFCQGVWDGLVEAQSNFPTLNIDTIMSIALKKGYKFRWLLPEGEDLLLLHQKDKEYVEGIINGLQEAKLSFPTLDIKATIDAVMQQKYGKKPPMDVGEASTSSHQHESSKEQSIDPKQQQMMMEMFWDGVADGLHEAKNNFPSLHIQKTLTSIFNKGNRVKWLLPKSPLPQPQVEKNIYIEGIAIGLLEAKLSFPTLDIDATLDIVLSKGSHKFPSSIDEKGKQPMDVQEPSSSRLDESSEEQNIDPQELEIMRENLCRGMLDGLLEAQTSFPTLDIETTMIEAVKKGSRFKWLILDSEIEIPEGEGEDPLAHLKRKMYIEGVVNGLIEAKLSFPTLDIQATLTTVLSRGARKGPVEASSTIQEAEDSPTVIASSSNVNPLLRAFIMMNQESCEVEARSKLYWKLIEEHKALRKKFEEFENEIDAPDKDNSLLTWKNRYEELLEKLNTQSALSSSKMHTNITEYEKLAAVLKGRADELQRLYDDGIEGFQNSEEFQDLMSVIYLYGLRDGLLEAQVIILALYMDIKTSVSKENEEQVIGEAAKEVFDWTRVKIECLDDPLLQVFMMMKQGTCKSEAKSKIYWKLMEEHKALRKRFEEVTIALDKDSHLLPSWKNQYDELVEKLNTQSTLSAIEMHTNIPKYEKLAAILKGRTEELRRLYDDGIEGFQNSEEFQDLMNAIYLNGLQDGLLEAQAILLALDLDMDKITPVVSMENEEEEQATDEVVDNENLDGLVGVADIPSPSGHEVDNPNDTSNPSGSGVLSIFWNFFTYIILSCSRN. 1924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00429 1923 Pfam NB-ARC domain 193 418 IPR002182 GO:0043531
Seca7g00429 1923 Gene3D - 177 344 IPR027417 -
Seca7g00429 1923 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 10 834 IPR044974 GO:0006952
Seca7g00429 1923 Gene3D Ribonuclease Inhibitor 679 863 IPR032675 -
Seca7g00429 1923 Gene3D Ribonuclease Inhibitor 510 678 IPR032675 -
Seca7g00429 1923 Gene3D - 3 176 IPR035897 -
Seca7g00429 1923 Coils Coil 1547 1567 - -
Seca7g00429 1923 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 155 IPR035897 -
Seca7g00429 1923 Gene3D - 349 434 IPR042197 -
Seca7g00429 1923 ProSiteProfiles TIR domain profile. 8 178 IPR000157 GO:0007165
Seca7g00429 1923 MobiDBLite consensus disorder prediction 1234 1261 - -
Seca7g00429 1923 MobiDBLite consensus disorder prediction 1359 1391 - -
Seca7g00429 1923 SUPERFAMILY L domain-like 487 844 - -
Seca7g00429 1923 PRINTS Disease resistance protein signature 214 229 - -
Seca7g00429 1923 PRINTS Disease resistance protein signature 291 305 - -
Seca7g00429 1923 PRINTS Disease resistance protein signature 384 398 - -
Seca7g00429 1923 PRINTS Disease resistance protein signature 649 665 - -
Seca7g00429 1923 FunFam Disease resistance protein (TIR-NBS-LRR class) 6 179 - -
Seca7g00429 1923 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 444 IPR027417 -
Seca7g00429 1923 Coils Coil 1606 1626 - -
Seca7g00429 1923 SMART till_3 9 153 IPR000157 GO:0007165
Seca7g00429 1923 Coils Coil 1076 1096 - -
Seca7g00429 1923 Pfam TIR domain 10 181 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00429 Seca-Chr7 4496784 4509409 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00429 10 743 WRKY Transcription Factor Family AT4G12020 28.129 5.32e-70 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00429 - - gmx:100783795 1503.42