Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00407 ATGTCATCCAGCAATTCTCTGAATGTGGAATTGTCAAAGAAGACTTCATTTTTGGGTCTGAAAAGATGGGTTTTGATTGGGATTGGTGTTGGTGCATTTATAGTTCTGATTCTTTGTATATTATCTATATGGGTGATGTTTCGGAGAAAGTCTAAGAGATCTCTGGACAAGTACTCTGTATCTCAAATACCAAATATCTCAAAAGATATCAATGTCGACAAGGTTGGTGCGCAGAATTCTCATGTTCAACAAGAAAATGTGTTTATTCCTGTTCATGATAAGGCGAATGATAATAATTCAGACAAGGTATCAGTTCATTTGGGGATGAGCAAATCCAGTGATCCTGACAATGTCAGTCAGTGCAGCTCAATTTATCATCATGATAGAGGATTTAGTTCACTCTCAGGGGAAGAAGGAAGCTCTGGGAATGTTAAGAAGCAGTCTACATTGTCATATGGAGGACTGGCGACTACCTCTCCTTTAGTTGGCTTGCCGGAATTTTCTCATCTTGGGTGGGGGCACTGGTTTACACTTAGAGATCTGGAACAAGCAACCAATCGCTTCTCAGCTGAGAACATTCTTGGTGAAGGTGGATATGGGGTTGTTTACAGGGGCAGACTGATCAATGGAACGGAGGTGGCAGTGAAAAAACTGCTTAACAATTTGGGACAAGCAGAGAAAGAATTCAGGGTTGAAGTGGAGGCTATAGGTCATGTTAGGCATAAGCATCTTGTGCGCCTGCTCGGATATTGCGTAGAAGGTGTTCACAGGCTGCTGATATATGAATATGTGAACAATGGTAACTTAGAACAATGGTTACATGGGGACATGCGCCAGCATGGGACACTTACCTGGGAGGCCCGCATGAAAGTTTTGCTTGGCACAGCAAAAGCTTATGTGGCACCGGAATATGCTAACAGTGGTTTGTTAAATGAGAAGAGTGACATTTACAGCTTTGGTGTCCTTCTGCTGGAAGCAGTTACTGGAAGGGACCCTGTAGACTATGCACGTCCTGCCAATGAGGTTAATCTTGTTGAATGGCTCAAGATGATGGTGGGGGCAAGGAGGGCTGAGGAAGTTGTGGACTCAAGCCTCGAAGTTAAACCATCAGCGCGTGCTTTAAAACGTTCCCTTCTGGTTGCACTTAGGTGTATTGATCCTGATGCTGACAAGAGGCCCAAAATGAGTCAAGTTGTAAGGATGCTCGAAGCTGATGAATATCCATTTCGAGAGGATCGAAGGAATAGAAGGAGCGGCACTAGCAGCGTTGAAATTGAAGCAGTGAAGGATATTTCTGGTCCATCTGATGCTGAAAAGGTGGGGAATTCTGAAAGCCATGTGCCTGAAACAACTCAAGGATAG 1362 0.4383 MSSSNSLNVELSKKTSFLGLKRWVLIGIGVGAFIVLILCILSIWVMFRRKSKRSLDKYSVSQIPNISKDINVDKVGAQNSHVQQENVFIPVHDKANDNNSDKVSVHLGMSKSSDPDNVSQCSSIYHHDRGFSSLSGEEGSSGNVKKQSTLSYGGLATTSPLVGLPEFSHLGWGHWFTLRDLEQATNRFSAENILGEGGYGVVYRGRLINGTEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKHLVRLLGYCVEGVHRLLIYEYVNNGNLEQWLHGDMRQHGTLTWEARMKVLLGTAKAYVAPEYANSGLLNEKSDIYSFGVLLLEAVTGRDPVDYARPANEVNLVEWLKMMVGARRAEEVVDSSLEVKPSARALKRSLLVALRCIDPDADKRPKMSQVVRMLEADEYPFREDRRNRRSGTSSVEIEAVKDISGPSDAEKVGNSESHVPETTQG. 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00407 453 FunFam Putative receptor-like serine/threonine-protein kinase 297 417 - -
Seca7g00407 453 FunFam Putative receptor-like protein kinase 170 263 - -
Seca7g00407 453 ProSiteProfiles Protein kinase domain profile. 188 453 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca7g00407 453 Coils Coil 208 228 - -
Seca7g00407 453 SUPERFAMILY Protein kinase-like (PK-like) 172 403 IPR011009 -
Seca7g00407 453 Gene3D Phosphorylase Kinase; domain 1 169 263 - -
Seca7g00407 453 MobiDBLite consensus disorder prediction 409 453 - -
Seca7g00407 453 PANTHER OS01G0323000 PROTEIN 1 298 - -
Seca7g00407 453 Pfam Protein tyrosine and serine/threonine kinase 298 402 IPR001245 GO:0004672|GO:0006468
Seca7g00407 453 Pfam Protein tyrosine and serine/threonine kinase 191 296 IPR001245 GO:0004672|GO:0006468
Seca7g00407 453 ProSitePatterns Protein kinases ATP-binding region signature. 194 217 IPR017441 GO:0005524
Seca7g00407 453 Gene3D Transferase(Phosphotransferase) domain 1 297 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00407 Seca-Chr7 4230957 4235200 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00407 175 406 Trihelix Transcription Factor Family AT5G38560 37.755 7.10e-51 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Seca7g00407 PK_Tyr_Ser-Thr 1.8e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00407 - - fve:101308781 642.114