Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca7g00406 ATGGCAAATGAGAATAAGGACCCTTATTTTGATCCCACCTTGTATCACAACCACCACCATGATGATGAACTCAATAATCACCCCCCATTTAGCTTTCCATTAACACAAAACTTTCAAGGATTTGATCCTTCTCATGCCACTTTCACTGACTACTTACATGGTGGTGATAACAATTCCATGGATTACTACAACACTCTCTCAAAAGCCTTTGACTTGTCTTGCTCATCATCTGAAGTGATCTCTTCCTCCATTGATGATAAGAAACCCAAAGCAGCAGTAGCAGGAGACTCAGTGGGGAACCAATCAACACCCAATTCCTCAGTCTCTTCCTCATCTAATGAAGCAGATGCAGTCACAGAAGAAGACTCAACCAAAACCAACAAGAATAAGGATAAACAGCCAAAACTGTGTGAAGAAGAAGATGAAAAGTCTAAGAAAGAGAACAAGGCCAAAAAGAAAGAGAAAAAGGCAAGAGAGCCACGGTTTGCGTTCTTGACTAAAAGTGAGATTGATCACCTTGAAGATGGATACAGATGGAGAAAATATGGACAGAAAGCAGTCAAGAATAGTCCCTACCCAAGGAGCTACTACAGATGCACTAGTCAGAAATGCAGTGTAAAGAAAAGGGTGGAGAGGTCATGCCAAGACACATCCATTGTGATGACAACCTATGAAGGGCAACACAACCATCACTGCCCAGCAACACTGAGGGGCAATGCAGCCACCATGTTGTCCTCACCTTCCATTTTTGGTTCCACTTCTATGGGATTGGGACCAAACTTACCCCAGGACTTCCTTGCTCAGTTTCTTCCAAGTTATAATCACCAAAATCCCAATATGTTCCACCACCAAAACCATATCCAGCAATCGCAGCAACAACAACAGCAACAACAACAGTTTCATGACTATGGATTGTTGCAAGATCTACTACCATCATTCCAAGGCAGACAAGGGCCATGA 960 0.4271 MANENKDPYFDPTLYHNHHHDDELNNHPPFSFPLTQNFQGFDPSHATFTDYLHGGDNNSMDYYNTLSKAFDLSCSSSEVISSSIDDKKPKAAVAGDSVGNQSTPNSSVSSSSNEADAVTEEDSTKTNKNKDKQPKLCEEEDEKSKKENKAKKKEKKAREPRFAFLTKSEIDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTSQKCSVKKRVERSCQDTSIVMTTYEGQHNHHCPATLRGNAATMLSSPSIFGSTSMGLGPNLPQDFLAQFLPSYNHQNPNMFHHQNHIQQSQQQQQQQQQFHDYGLLQDLLPSFQGRQGP. 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca7g00406 319 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 61 296 IPR044810 GO:0003700
Seca7g00406 319 MobiDBLite consensus disorder prediction 118 159 - -
Seca7g00406 319 ProSiteProfiles WRKY domain profile. 168 233 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca7g00406 319 MobiDBLite consensus disorder prediction 277 299 - -
Seca7g00406 319 FunFam WRKY transcription factor 57 159 233 - -
Seca7g00406 319 MobiDBLite consensus disorder prediction 96 117 - -
Seca7g00406 319 Gene3D WRKY domain 157 234 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca7g00406 319 SUPERFAMILY WRKY DNA-binding domain 166 233 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca7g00406 319 SMART WRKY_cls 173 232 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca7g00406 319 MobiDBLite consensus disorder prediction 83 159 - -
Seca7g00406 319 Pfam WRKY DNA -binding domain 174 230 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca7g00406 Seca-Chr7 4218304 4220164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca7g00406 1 238 WRKY Transcription Factor Family AT4G18170 50.204 2.00e-62 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Seca7g00406 WRKY 1.5e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca7g00406 - - aprc:113847247 362.844